Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC093591.1-201ENST00000491435 481 ntBASIC2.36□□□□□ -2.03
LSM3P62310 RPL21P129-201ENST00000491732 478 ntBASIC2.36□□□□□ -2.03
LSM3P62310 RPL21P16-201ENST00000495531 483 ntBASIC2.36□□□□□ -2.03
LSM3P62310 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LSM3P62310 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.36□□□□□ -2.03
LSM3P62310 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.36□□□□□ -2.03
LSM3P62310 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.36□□□□□ -2.03
LSM3P62310 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.36□□□□□ -2.03
LSM3P62310 PCNAP1-202ENST00000595299 752 ntBASIC2.36□□□□□ -2.03
LSM3P62310 RPL23AP78-201ENST00000599928 470 ntBASIC2.36□□□□□ -2.03
LSM3P62310 AC083809.1-201ENST00000615051 472 ntBASIC2.36□□□□□ -2.03
LSM3P62310 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.36□□□□□ -2.03
LSM3P62310 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LSM3P62310 AC026422.1-201ENST00000623961 452 ntBASIC2.36□□□□□ -2.03
LSM3P62310 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.36□□□□□ -2.03
LSM3P62310 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LSM3P62310 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LSM3P62310 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LSM3P62310 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LSM3P62310 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LSM3P62310 AP002907.1-201ENST00000606361 1430 ntBASIC2.35□□□□□ -2.03
LSM3P62310 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LSM3P62310 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.35□□□□□ -2.03
LSM3P62310 AC234772.1-201ENST00000377927 937 ntBASIC2.35□□□□□ -2.03
LSM3P62310 YPEL5P1-201ENST00000419731 367 ntBASIC2.35□□□□□ -2.03
LSM3P62310 C4BPAP2-201ENST00000428434 478 ntBASIC2.35□□□□□ -2.03
LSM3P62310 AC022018.1-201ENST00000430685 241 ntBASIC2.35□□□□□ -2.03
LSM3P62310 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM3P62310 TPMTP4-201ENST00000450749 678 ntBASIC2.35□□□□□ -2.03
LSM3P62310 CYCSP35-201ENST00000451978 304 ntBASIC2.35□□□□□ -2.03
LSM3P62310 RPS4XP10-201ENST00000465034 731 ntBASIC2.35□□□□□ -2.03
LSM3P62310 AC146507.1-201ENST00000468335 354 ntBASIC2.35□□□□□ -2.03
LSM3P62310 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM3P62310 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.35□□□□□ -2.03
LSM3P62310 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM3P62310 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LSM3P62310 HSPD1P15-201ENST00000505573 1122 ntBASIC2.35□□□□□ -2.03
LSM3P62310 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM3P62310 SNORA31.11-201ENST00000516528 139 ntBASIC2.35□□□□□ -2.03
LSM3P62310 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.35□□□□□ -2.03
LSM3P62310 AC026403.1-201ENST00000518938 295 ntBASIC2.35□□□□□ -2.03
LSM3P62310 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.35□□□□□ -2.03
LSM3P62310 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM3P62310 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LSM3P62310 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LSM3P62310 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.35□□□□□ -2.03
LSM3P62310 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.35□□□□□ -2.03
LSM3P62310 MIR4446-201ENST00000578505 67 ntBASIC2.35□□□□□ -2.03
LSM3P62310 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
LSM3P62310 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.35□□□□□ -2.03
LSM3P62310 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
LSM3P62310 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LSM3P62310 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.35□□□□□ -2.03
LSM3P62310 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
LSM3P62310 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LSM3P62310 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LSM3P62310 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.34□□□□□ -2.03
LSM3P62310 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LSM3P62310 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
LSM3P62310 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LSM3P62310 RNU6-317P-201ENST00000384031 107 ntBASIC2.34□□□□□ -2.03
LSM3P62310 AL138880.1-201ENST00000405824 642 ntBASIC2.34□□□□□ -2.03
LSM3P62310 AC109780.2-201ENST00000413467 845 ntBASIC2.34□□□□□ -2.03
LSM3P62310 AC091286.1-201ENST00000431233 461 ntBASIC2.34□□□□□ -2.03
LSM3P62310 AC005189.1-201ENST00000431286 310 ntBASIC2.34□□□□□ -2.03
LSM3P62310 RPL37P1-201ENST00000432310 284 ntBASIC2.34□□□□□ -2.03
LSM3P62310 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM3P62310 HMGN2P20-201ENST00000437531 273 ntBASIC2.34□□□□□ -2.03
LSM3P62310 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM3P62310 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM3P62310 RPL21P104-201ENST00000464143 478 ntBASIC2.34□□□□□ -2.03
LSM3P62310 AL161747.1-201ENST00000480068 358 ntBASIC2.34□□□□□ -2.03
LSM3P62310 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LSM3P62310 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM3P62310 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.34□□□□□ -2.03
LSM3P62310 RNU6-56P-201ENST00000516986 93 ntBASIC2.34□□□□□ -2.03
LSM3P62310 CDH12P4-201ENST00000517835 295 ntBASIC2.34□□□□□ -2.03
LSM3P62310 CDH12P3-201ENST00000517935 295 ntBASIC2.34□□□□□ -2.03
LSM3P62310 CDH12P1-201ENST00000518435 295 ntBASIC2.34□□□□□ -2.03
LSM3P62310 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.34□□□□□ -2.03
LSM3P62310 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.34□□□□□ -2.03
LSM3P62310 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.34□□□□□ -2.03
LSM3P62310 OR6C73P-201ENST00000546432 358 ntBASIC2.34□□□□□ -2.03
LSM3P62310 MTND4LP24-201ENST00000572277 291 ntBASIC2.34□□□□□ -2.03
LSM3P62310 MIR5680-201ENST00000577577 84 ntBASIC2.34□□□□□ -2.03
LSM3P62310 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.34□□□□□ -2.03
LSM3P62310 BNIP3P11-201ENST00000603878 563 ntBASIC2.34□□□□□ -2.03
LSM3P62310 AC016252.1-201ENST00000609721 474 ntBASIC2.34□□□□□ -2.03
LSM3P62310 AC022079.2-201ENST00000619739 566 ntBASIC2.34□□□□□ -2.03
LSM3P62310 CYP3A51P-201ENST00000633513 256 ntBASIC2.34□□□□□ -2.03
LSM3P62310 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.34□□□□□ -2.03
LSM3P62310 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.34□□□□□ -2.03
LSM3P62310 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.04
LSM3P62310 ZNF807-201ENST00000328088 1707 ntBASIC2.34□□□□□ -2.04
LSM3P62310 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
LSM3P62310 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LSM3P62310 AC073055.1-201ENST00000456901 1621 ntBASIC2.33□□□□□ -2.04
LSM3P62310 AC004925.1-201ENST00000624256 2706 ntBASIC2.33□□□□□ -2.04
LSM3P62310 GSTA8P-201ENST00000404253 637 ntBASIC2.33□□□□□ -2.04
LSM3P62310 RNU6ATAC-201ENST00000408749 126 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms