Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC025881.1-201ENST00000518851 512 ntBASIC3.88□□□□□ -1.79
SEC61A1P61619 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.88□□□□□ -1.79
SEC61A1P61619 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.88□□□□□ -1.79
SEC61A1P61619 AP001781.1-201ENST00000530977 207 ntBASIC3.88□□□□□ -1.79
SEC61A1P61619 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.88□□□□□ -1.79
SEC61A1P61619 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.88□□□□□ -1.79
SEC61A1P61619 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.88□□□□□ -1.79
SEC61A1P61619 AC124068.1-201ENST00000563131 678 ntBASIC3.88□□□□□ -1.79
SEC61A1P61619 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.88□□□□□ -1.79
SEC61A1P61619 MIR4504-201ENST00000577413 92 ntBASIC3.88□□□□□ -1.79
SEC61A1P61619 AP001004.1-201ENST00000582468 324 ntBASIC3.88□□□□□ -1.79
SEC61A1P61619 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.88□□□□□ -1.79
SEC61A1P61619 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.88□□□□□ -1.79
SEC61A1P61619 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.88□□□□□ -1.79
SEC61A1P61619 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.88□□□□□ -1.79
SEC61A1P61619 SEPT7P9-203ENST00000604116 343 ntBASIC3.88□□□□□ -1.79
SEC61A1P61619 AC115286.1-201ENST00000604298 434 ntBASIC3.88□□□□□ -1.79
SEC61A1P61619 NDUFA8P1-201ENST00000605525 367 ntBASIC3.88□□□□□ -1.79
SEC61A1P61619 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.88□□□□□ -1.79
SEC61A1P61619 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.88□□□□□ -1.79
SEC61A1P61619 AC233309.1-201ENST00000619522 751 ntBASIC3.88□□□□□ -1.79
SEC61A1P61619 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.88□□□□□ -1.79
SEC61A1P61619 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.88□□□□□ -1.79
SEC61A1P61619 PHKBP1-201ENST00000450951 1951 ntBASIC3.88□□□□□ -1.79
SEC61A1P61619 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A1P61619 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A1P61619 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SEC61A1P61619 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A1P61619 AL118496.1-201ENST00000440201 1812 ntBASIC3.88□□□□□ -1.79
SEC61A1P61619 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SEC61A1P61619 MAPK10-253ENST00000641010 4072 ntBASIC3.88□□□□□ -1.79
SEC61A1P61619 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A1P61619 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A1P61619 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.87□□□□□ -1.79
SEC61A1P61619 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SEC61A1P61619 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A1P61619 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A1P61619 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A1P61619 AL445437.1-201ENST00000623157 3087 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A1P61619 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A1P61619 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SEC61A1P61619 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A1P61619 OR4K15-201ENST00000305051 1216 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 RNU6-251P-201ENST00000363235 104 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 SNORD113.2-201ENST00000364166 89 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 RNA5SP151-201ENST00000365632 117 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SEC61A1P61619 RNU1-44P-201ENST00000384453 163 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 RNA5SP397-201ENST00000391323 118 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 RPS3AP23-201ENST00000401762 784 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 Z98745.1-201ENST00000402553 494 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 RPL23AP48-201ENST00000406913 488 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A1P61619 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.87□□□□□ -1.79
SEC61A1P61619 RN7SKP267-201ENST00000410381 285 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 HMGB1P11-201ENST00000413899 637 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A1P61619 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A1P61619 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A1P61619 RPS27AP7-201ENST00000422792 455 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A1P61619 NIPA2P1-201ENST00000426223 976 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A1P61619 RPL23AP1-201ENST00000428990 471 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A1P61619 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A1P61619 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 H2AFZP5-201ENST00000446960 382 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 NANOGNBP1-201ENST00000448444 480 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A1P61619 TRGVB-201ENST00000453257 471 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A1P61619 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A1P61619 snoU13.1-201ENST00000459157 104 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 RPS7P7-201ENST00000463499 571 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A1P61619 MTND6P6-201ENST00000478031 263 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.87□□□□□ -1.79
SEC61A1P61619 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A1P61619 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A1P61619 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.87□□□□□ -1.79
SEC61A1P61619 AP002748.2-201ENST00000528671 348 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A1P61619 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A1P61619 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A1P61619 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A1P61619 MIR4715-201ENST00000584117 79 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 AC011477.5-201ENST00000586571 259 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SEC61A1P61619 AC126118.1-201ENST00000607744 628 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 U6atac.1-201ENST00000616025 117 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.87□□□□□ -1.79
SEC61A1P61619 U3.53-201ENST00000628922 216 ntBASIC3.87□□□□□ -1.79
SEC61A1P61619 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SEC61A1P61619 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A1P61619 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A1P61619 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A1P61619 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms