Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.56□□□□□ -2
CMC4P56277 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.56□□□□□ -2
CMC4P56277 VN1R17P-201ENST00000472048 1090 ntBASIC2.56□□□□□ -2
CMC4P56277 AC084357.1-201ENST00000473404 255 ntBASIC2.56□□□□□ -2
CMC4P56277 RPS17P11-201ENST00000474297 293 ntBASIC2.56□□□□□ -2
CMC4P56277 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.56□□□□□ -2
CMC4P56277 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.56□□□□□ -2
CMC4P56277 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.56□□□□□ -2
CMC4P56277 RNU6-334P-201ENST00000517072 102 ntBASIC2.56□□□□□ -2
CMC4P56277 IGKV2D-23-201ENST00000518179 286 ntBASIC2.56□□□□□ -2
CMC4P56277 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC2.56□□□□□ -2
CMC4P56277 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.56□□□□□ -2
CMC4P56277 ARL2BPP5-201ENST00000523141 481 ntBASIC2.56□□□□□ -2
CMC4P56277 AP000790.1-201ENST00000528891 737 ntBASIC2.56□□□□□ -2
CMC4P56277 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.56□□□□□ -2
CMC4P56277 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.56□□□□□ -2
CMC4P56277 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.56□□□□□ -2
CMC4P56277 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.56□□□□□ -2
CMC4P56277 AC015911.5-201ENST00000587076 451 ntBASIC2.56□□□□□ -2
CMC4P56277 AC002487.1-201ENST00000604565 994 ntBASIC2.56□□□□□ -2
CMC4P56277 HSPE1P14-201ENST00000605812 302 ntBASIC2.56□□□□□ -2
CMC4P56277 AL513477.2-201ENST00000607858 568 ntBASIC2.56□□□□□ -2
CMC4P56277 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC2.56□□□□□ -2
CMC4P56277 AC015967.1-201ENST00000619893 476 ntBASIC2.56□□□□□ -2
CMC4P56277 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.56□□□□□ -2
CMC4P56277 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.56□□□□□ -2
CMC4P56277 BX649567.1-201ENST00000642071 1134 ntBASIC2.56□□□□□ -2
CMC4P56277 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC2.56□□□□□ -2
CMC4P56277 FAM35DP-201ENST00000323387 2712 ntBASIC2.56□□□□□ -2
CMC4P56277 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CMC4P56277 AC007656.2-201ENST00000624902 4547 ntBASIC2.56□□□□□ -2
CMC4P56277 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
CMC4P56277 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.56□□□□□ -2
CMC4P56277 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.56□□□□□ -2
CMC4P56277 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.56□□□□□ -2
CMC4P56277 AC058791.1-201ENST00000608412 3198 ntBASIC2.55□□□□□ -2
CMC4P56277 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.55□□□□□ -2
CMC4P56277 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CMC4P56277 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.55□□□□□ -2
CMC4P56277 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CMC4P56277 RNU6-374P-201ENST00000364146 108 ntBASIC2.55□□□□□ -2
CMC4P56277 SNORA73.2-201ENST00000364946 201 ntBASIC2.55□□□□□ -2
CMC4P56277 U6.112-201ENST00000384129 70 ntBASIC2.55□□□□□ -2
CMC4P56277 MIR23B-201ENST00000384832 97 ntBASIC2.55□□□□□ -2
CMC4P56277 MT-TC-201ENST00000387405 66 ntBASIC2.55□□□□□ -2
CMC4P56277 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CMC4P56277 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.55□□□□□ -2
CMC4P56277 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.55□□□□□ -2
CMC4P56277 CRYBB2P1-203ENST00000415709 538 ntBASIC2.55□□□□□ -2
CMC4P56277 AC127526.1-201ENST00000417526 366 ntBASIC2.55□□□□□ -2
CMC4P56277 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.55□□□□□ -2
CMC4P56277 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.55□□□□□ -2
CMC4P56277 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.55□□□□□ -2
CMC4P56277 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.55□□□□□ -2
CMC4P56277 RPL7P28-201ENST00000437739 740 ntBASIC2.55□□□□□ -2
CMC4P56277 HMGB1P12-201ENST00000438594 598 ntBASIC2.55□□□□□ -2
CMC4P56277 AC000041.1-201ENST00000439655 175 ntBASIC2.55□□□□□ -2
CMC4P56277 AL592437.1-201ENST00000443781 492 ntBASIC2.55□□□□□ -2
CMC4P56277 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.55□□□□□ -2
CMC4P56277 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.55□□□□□ -2
CMC4P56277 AC104073.1-201ENST00000451988 151 ntBASIC2.55□□□□□ -2
CMC4P56277 RPL7L1P8-201ENST00000469911 741 ntBASIC2.55□□□□□ -2
CMC4P56277 RN7SL293P-201ENST00000481765 281 ntBASIC2.55□□□□□ -2
CMC4P56277 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.55□□□□□ -2
CMC4P56277 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.55□□□□□ -2
CMC4P56277 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.55□□□□□ -2
CMC4P56277 RNA5SP135-201ENST00000517019 125 ntBASIC2.55□□□□□ -2
CMC4P56277 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.55□□□□□ -2
CMC4P56277 AP004371.1-201ENST00000525240 214 ntBASIC2.55□□□□□ -2
CMC4P56277 AP000619.3-201ENST00000535634 1127 ntBASIC2.55□□□□□ -2
CMC4P56277 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.55□□□□□ -2
CMC4P56277 NIFKP8-201ENST00000560500 874 ntBASIC2.55□□□□□ -2
CMC4P56277 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.55□□□□□ -2
CMC4P56277 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.55□□□□□ -2
CMC4P56277 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.55□□□□□ -2
CMC4P56277 MIR1254-2-201ENST00000579553 63 ntBASIC2.55□□□□□ -2
CMC4P56277 MIR4425-201ENST00000580572 84 ntBASIC2.55□□□□□ -2
CMC4P56277 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.55□□□□□ -2
CMC4P56277 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.55□□□□□ -2
CMC4P56277 DPRXP5-201ENST00000604662 539 ntBASIC2.55□□□□□ -2
CMC4P56277 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.55□□□□□ -2
CMC4P56277 AC084824.5-201ENST00000612009 413 ntBASIC2.55□□□□□ -2
CMC4P56277 AC008759.3-201ENST00000613300 508 ntBASIC2.55□□□□□ -2
CMC4P56277 AC005156.1-201ENST00000613371 573 ntBASIC2.55□□□□□ -2
CMC4P56277 AL354976.1-201ENST00000613843 387 ntBASIC2.55□□□□□ -2
CMC4P56277 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.55□□□□□ -2
CMC4P56277 SNORD39.4-201ENST00000620099 78 ntBASIC2.55□□□□□ -2
CMC4P56277 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.55□□□□□ -2
CMC4P56277 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.55□□□□□ -2
CMC4P56277 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.55□□□□□ -2
CMC4P56277 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.55□□□□□ -2
CMC4P56277 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CMC4P56277 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CMC4P56277 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.55□□□□□ -2
CMC4P56277 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
CMC4P56277 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CMC4P56277 TNPO1P3-201ENST00000436471 2662 ntBASIC2.55□□□□□ -2
CMC4P56277 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CMC4P56277 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.54□□□□□ -2
CMC4P56277 AL513302.2-201ENST00000562313 1842 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms