Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH4P55283 RN7SL601P-201ENST00000471221 293 ntBASIC3.44□□□□□ -1.86
CDH4P55283 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH4P55283 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH4P55283 AC092470.1-201ENST00000546187 132 ntBASIC3.44□□□□□ -1.86
CDH4P55283 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH4P55283 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH4P55283 TGIF1P1-201ENST00000558095 802 ntBASIC3.44□□□□□ -1.86
CDH4P55283 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH4P55283 AC022069.1-201ENST00000582910 658 ntBASIC3.44□□□□□ -1.86
CDH4P55283 AL450489.1-201ENST00000612071 468 ntBASIC3.44□□□□□ -1.86
CDH4P55283 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH4P55283 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH4P55283 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH4P55283 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CDH4P55283 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH4P55283 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH4P55283 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH4P55283 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH4P55283 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CDH4P55283 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CDH4P55283 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH4P55283 Y_RNA.493-201ENST00000384422 102 ntBASIC3.43□□□□□ -1.86
CDH4P55283 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH4P55283 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH4P55283 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH4P55283 RPL23AP82-202ENST00000427528 469 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AC114973.1-201ENST00000429057 632 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH4P55283 AL512661.1-201ENST00000434586 1253 ntBASIC3.43□□□□□ -1.86
CDH4P55283 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH4P55283 AL662791.1-201ENST00000441992 928 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH4P55283 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH4P55283 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH4P55283 NF1P3-201ENST00000457709 450 ntBASIC3.43□□□□□ -1.86
CDH4P55283 CENPBD1P1-201ENST00000464061 469 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AC091153.1-201ENST00000466297 402 ntBASIC3.43□□□□□ -1.86
CDH4P55283 VN1R17P-201ENST00000472048 1090 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH4P55283 PCBP2P3-201ENST00000509726 843 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AC025768.1-201ENST00000510057 267 ntBASIC3.43□□□□□ -1.86
CDH4P55283 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH4P55283 RN7SKP116-201ENST00000516902 319 ntBASIC3.43□□□□□ -1.86
CDH4P55283 RNU6-1073P-201ENST00000517182 106 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AP004371.1-201ENST00000525240 214 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AP000916.1-201ENST00000533869 835 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH4P55283 AC005476.1-201ENST00000554427 397 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AC015917.1-201ENST00000579654 510 ntBASIC3.43□□□□□ -1.86
CDH4P55283 MIR3690-201ENST00000580266 75 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AC011468.4-201ENST00000603942 409 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AC016542.1-201ENST00000608259 493 ntBASIC3.43□□□□□ -1.86
CDH4P55283 AL445493.3-201ENST00000619568 477 ntBASIC3.43□□□□□ -1.86
CDH4P55283 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH4P55283 SNORA50A-202ENST00000629536 136 ntBASIC3.43□□□□□ -1.86
CDH4P55283 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH4P55283 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH4P55283 AC021755.1-201ENST00000559747 1447 ntBASIC3.43□□□□□ -1.86
CDH4P55283 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CDH4P55283 ZNF542P-204ENST00000482727 1305 ntBASIC3.43□□□□□ -1.86
CDH4P55283 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH4P55283 MTND5P1-201ENST00000445440 1375 ntBASIC3.42□□□□□ -1.86
CDH4P55283 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH4P55283 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH4P55283 RNU6-481P-201ENST00000384194 107 ntBASIC3.42□□□□□ -1.86
CDH4P55283 RNU6-441P-201ENST00000384545 106 ntBASIC3.42□□□□□ -1.86
CDH4P55283 MIR591-201ENST00000385290 95 ntBASIC3.42□□□□□ -1.86
CDH4P55283 TAF9BP1-201ENST00000396646 746 ntBASIC3.42□□□□□ -1.86
CDH4P55283 RNU4-78P-201ENST00000410940 126 ntBASIC3.42□□□□□ -1.86
CDH4P55283 HMGN1P24-201ENST00000412282 298 ntBASIC3.42□□□□□ -1.86
CDH4P55283 AL356968.1-201ENST00000416622 474 ntBASIC3.42□□□□□ -1.86
CDH4P55283 AC127526.1-201ENST00000417526 366 ntBASIC3.42□□□□□ -1.86
CDH4P55283 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH4P55283 RPL21P66-201ENST00000426566 466 ntBASIC3.42□□□□□ -1.86
CDH4P55283 AC005326.1-201ENST00000429197 123 ntBASIC3.42□□□□□ -1.86
CDH4P55283 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH4P55283 VDAC1P3-201ENST00000434069 851 ntBASIC3.42□□□□□ -1.86
CDH4P55283 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH4P55283 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH4P55283 AL353718.1-201ENST00000451028 517 ntBASIC3.42□□□□□ -1.86
CDH4P55283 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH4P55283 RPS4XP13-201ENST00000483219 789 ntBASIC3.42□□□□□ -1.86
CDH4P55283 RPL7P38-201ENST00000488396 739 ntBASIC3.42□□□□□ -1.86
CDH4P55283 AC104057.1-201ENST00000515547 497 ntBASIC3.42□□□□□ -1.86
CDH4P55283 RN7SKP289-201ENST00000517244 295 ntBASIC3.42□□□□□ -1.86
CDH4P55283 AC093331.1-201ENST00000521474 169 ntBASIC3.42□□□□□ -1.86
CDH4P55283 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.42□□□□□ -1.86
CDH4P55283 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH4P55283 AC079148.1-201ENST00000565944 819 ntBASIC3.42□□□□□ -1.86
CDH4P55283 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH4P55283 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH4P55283 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH4P55283 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.42□□□□□ -1.86
CDH4P55283 AC113368.1-201ENST00000603736 382 ntBASIC3.42□□□□□ -1.86
CDH4P55283 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH4P55283 AL159169.3-201ENST00000608871 561 ntBASIC3.42□□□□□ -1.86
CDH4P55283 RNVU1-4-201ENST00000612985 164 ntBASIC3.42□□□□□ -1.86
CDH4P55283 VN1R9P-201ENST00000614184 867 ntBASIC3.42□□□□□ -1.86
CDH4P55283 AC008121.2-201ENST00000614647 523 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms