Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.88□□□□□ -1.79
NEDD4P46934 PTMAP5-201ENST00000393073 333 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD4P46934 MTCO2P23-201ENST00000425216 680 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.88□□□□□ -1.79
NEDD4P46934 AL009174.1-201ENST00000426577 416 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.88□□□□□ -1.79
NEDD4P46934 AC091862.1-201ENST00000438016 1100 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.88□□□□□ -1.79
NEDD4P46934 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.88□□□□□ -1.79
NEDD4P46934 AC106872.2-201ENST00000494303 480 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.88□□□□□ -1.79
NEDD4P46934 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.88□□□□□ -1.79
NEDD4P46934 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.88□□□□□ -1.79
NEDD4P46934 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.88□□□□□ -1.79
NEDD4P46934 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD4P46934 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.88□□□□□ -1.79
NEDD4P46934 AC015917.1-201ENST00000579654 510 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD4P46934 AP001542.2-201ENST00000593141 364 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.88□□□□□ -1.79
NEDD4P46934 CKS1BP3-201ENST00000600888 237 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 AC002487.1-201ENST00000604565 994 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 AL050303.3-201ENST00000613704 284 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 VN1R7P-201ENST00000619242 903 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 AL356321.1-201ENST00000621360 228 ntBASIC3.88□□□□□ -1.79
NEDD4P46934 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.88□□□□□ -1.79
NEDD4P46934 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NEDD4P46934 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD4P46934 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.87□□□□□ -1.79
NEDD4P46934 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD4P46934 AC111188.2-201ENST00000529697 1387 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD4P46934 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NEDD4P46934 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NEDD4P46934 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD4P46934 RPL31P52-201ENST00000407532 367 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 RNA5SP120-201ENST00000410900 112 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 BTF3P8-201ENST00000414577 526 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 AC006946.1-201ENST00000429106 328 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 GTF2IP3-201ENST00000433887 494 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.87□□□□□ -1.79
NEDD4P46934 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD4P46934 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD4P46934 MTCYBP42-201ENST00000444653 1130 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 EXOSC3P1-201ENST00000448649 500 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD4P46934 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD4P46934 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.87□□□□□ -1.79
NEDD4P46934 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.87□□□□□ -1.79
NEDD4P46934 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.87□□□□□ -1.79
NEDD4P46934 RPL21P131-201ENST00000497298 483 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.87□□□□□ -1.79
NEDD4P46934 AC118282.2-201ENST00000508739 374 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 AC008885.2-201ENST00000509506 930 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 RNU6-416P-201ENST00000516265 103 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 snoZ278.1-201ENST00000517059 112 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 AC104027.1-201ENST00000521887 300 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.87□□□□□ -1.79
NEDD4P46934 DEFB130C-202ENST00000530001 230 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD4P46934 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.87□□□□□ -1.79
NEDD4P46934 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.87□□□□□ -1.79
NEDD4P46934 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD4P46934 AL442163.2-201ENST00000553912 710 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 BPTFP1-201ENST00000579209 492 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.87□□□□□ -1.79
NEDD4P46934 MIR4760-201ENST00000585040 80 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD4P46934 AL031985.2-201ENST00000600955 480 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 AC073657.2-201ENST00000605661 303 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 AP003072.4-201ENST00000624580 310 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
NEDD4P46934 AC138393.1-206ENST00000540997 1886 ntBASIC3.87□□□□□ -1.79
NEDD4P46934 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD4P46934 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD4P46934 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.87□□□□□ -1.79
NEDD4P46934 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NEDD4P46934 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD4P46934 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD4P46934 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
NEDD4P46934 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NEDD4P46934 AC008725.1-201ENST00000605123 2263 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.86□□□□□ -1.79
NEDD4P46934 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD4P46934 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD4P46934 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD4P46934 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD4P46934 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD4P46934 RNU1-87P-201ENST00000363727 170 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NEDD4P46934 MTCO2P31-201ENST00000402702 684 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.86□□□□□ -1.79
NEDD4P46934 AC009237.5-201ENST00000414271 501 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.86□□□□□ -1.79
NEDD4P46934 AC012065.2-201ENST00000421295 375 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 RPL31P12-201ENST00000422587 358 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms