Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.79□□□□□ -1.8
APOBEC1P41238 RHOT1P2-201ENST00000366423 333 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 MT-TC-201ENST00000387405 66 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
APOBEC1P41238 RPL31P1-201ENST00000398116 372 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
APOBEC1P41238 AL031679.1-201ENST00000400616 525 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 MTND4LP20-201ENST00000402379 270 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.79□□□□□ -1.8
APOBEC1P41238 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.79□□□□□ -1.8
APOBEC1P41238 RPL31P45-201ENST00000419532 356 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 GLRXP1-201ENST00000423261 334 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.79□□□□□ -1.8
APOBEC1P41238 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.79□□□□□ -1.8
APOBEC1P41238 BTF3P10-201ENST00000433415 495 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 AC127537.2-201ENST00000439258 465 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.79□□□□□ -1.8
APOBEC1P41238 MTND1P30-201ENST00000441241 901 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.79□□□□□ -1.8
APOBEC1P41238 RNA5SP246-201ENST00000458909 119 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 AC146507.1-201ENST00000468335 354 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.79□□□□□ -1.8
APOBEC1P41238 AC041039.1-201ENST00000485656 536 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.79□□□□□ -1.8
APOBEC1P41238 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.79□□□□□ -1.8
APOBEC1P41238 AC108475.1-201ENST00000507880 950 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.79□□□□□ -1.8
APOBEC1P41238 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.79□□□□□ -1.8
APOBEC1P41238 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.79□□□□□ -1.8
APOBEC1P41238 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.79□□□□□ -1.8
APOBEC1P41238 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.79□□□□□ -1.8
APOBEC1P41238 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.79□□□□□ -1.8
APOBEC1P41238 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
APOBEC1P41238 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.79□□□□□ -1.8
APOBEC1P41238 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.79□□□□□ -1.8
APOBEC1P41238 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.79□□□□□ -1.8
APOBEC1P41238 NBR2-204ENST00000587322 63 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.79□□□□□ -1.8
APOBEC1P41238 AC106028.5-201ENST00000610332 395 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
APOBEC1P41238 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.79□□□□□ -1.8
APOBEC1P41238 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
APOBEC1P41238 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
APOBEC1P41238 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
APOBEC1P41238 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
APOBEC1P41238 MTCO1P24-201ENST00000515438 1558 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 AC009951.1-201ENST00000623674 2614 ntBASIC3.79□□□□□ -1.8
APOBEC1P41238 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
APOBEC1P41238 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.79□□□□□ -1.8
APOBEC1P41238 NUP58P1-201ENST00000502546 1738 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC1P41238 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC1P41238 Z82217.1-201ENST00000625157 8149 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC1P41238 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
APOBEC1P41238 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.78□□□□□ -1.8
APOBEC1P41238 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.78□□□□□ -1.8
APOBEC1P41238 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.78□□□□□ -1.8
APOBEC1P41238 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
APOBEC1P41238 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
APOBEC1P41238 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC1P41238 MIR383-201ENST00000362257 73 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 RNU6-433P-201ENST00000363216 104 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 RNU6-660P-201ENST00000364566 109 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC1P41238 SNORA56-201ENST00000383966 129 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 RNU6-356P-201ENST00000384140 107 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 RNU6-952P-201ENST00000391164 108 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.78□□□□□ -1.8
APOBEC1P41238 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.78□□□□□ -1.8
APOBEC1P41238 HSFY4P-201ENST00000415994 1181 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 AL807761.1-201ENST00000417622 171 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 MTCO2P5-201ENST00000422621 426 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.78□□□□□ -1.8
APOBEC1P41238 RPS27AP12-201ENST00000429552 465 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 COX6B1P7-201ENST00000430845 235 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 MTND4P32-201ENST00000437189 1237 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.78□□□□□ -1.8
APOBEC1P41238 RPL23AP33-201ENST00000442301 452 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.78□□□□□ -1.8
APOBEC1P41238 PAXBP1P1-201ENST00000449315 447 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.78□□□□□ -1.8
APOBEC1P41238 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.78□□□□□ -1.8
APOBEC1P41238 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC1P41238 RPL36AP13-201ENST00000457490 317 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.78□□□□□ -1.8
APOBEC1P41238 AC109327.1-201ENST00000471666 403 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 SETP11-201ENST00000473027 690 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 AC006517.1-201ENST00000480485 328 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.78□□□□□ -1.8
APOBEC1P41238 AC105137.1-201ENST00000484355 562 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.78□□□□□ -1.8
APOBEC1P41238 OR5H5P-201ENST00000503164 928 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.78□□□□□ -1.8
APOBEC1P41238 AC093809.1-201ENST00000509155 340 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 MTCO3P28-201ENST00000513351 515 ntBASIC3.78□□□□□ -1.8
APOBEC1P41238 IGKV2D-36-201ENST00000518643 226 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms