Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC8P31273 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC8P31273 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.13□□□□□ -1.75
HOXC8P31273 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC8P31273 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
HOXC8P31273 VN1R78P-201ENST00000597393 564 ntBASIC4.13□□□□□ -1.75
HOXC8P31273 DUXAP3-201ENST00000603616 594 ntBASIC4.13□□□□□ -1.75
HOXC8P31273 AL035411.2-201ENST00000604022 421 ntBASIC4.13□□□□□ -1.75
HOXC8P31273 AL513477.2-201ENST00000607858 568 ntBASIC4.13□□□□□ -1.75
HOXC8P31273 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC8P31273 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.13□□□□□ -1.75
HOXC8P31273 AC243312.2-201ENST00000623340 601 ntBASIC4.13□□□□□ -1.75
HOXC8P31273 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.13□□□□□ -1.75
HOXC8P31273 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC8P31273 AC087821.2-201ENST00000637086 450 ntBASIC4.13□□□□□ -1.75
HOXC8P31273 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC8P31273 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HOXC8P31273 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC8P31273 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
HOXC8P31273 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC8P31273 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC8P31273 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC8P31273 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXC8P31273 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HOXC8P31273 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC8P31273 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HOXC8P31273 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC8P31273 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC8P31273 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC8P31273 RNU6-839P-201ENST00000363347 108 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 RNVU1-3-201ENST00000364313 161 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 RNA5SP72-201ENST00000364442 117 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC8P31273 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC8P31273 AL133264.1-201ENST00000407157 562 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AL139098.1-201ENST00000407291 389 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC8P31273 AL513175.2-201ENST00000422071 443 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC8P31273 AC005517.2-201ENST00000424673 553 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC8P31273 HIGD1AP12-201ENST00000427832 281 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC8P31273 USP9YP7-201ENST00000436723 430 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC8P31273 EEF1A1P39-201ENST00000440791 250 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 MTCYBP42-201ENST00000444653 1130 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 USP9YP32-201ENST00000452432 430 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 MRPL42P4-201ENST00000453267 443 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 RBMY2UP-201ENST00000453474 324 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 SNRPGP5-201ENST00000456003 220 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 WBP1LP4-201ENST00000505043 344 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC8P31273 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXC8P31273 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.12□□□□□ -1.75
HOXC8P31273 RNA5SP208-201ENST00000516156 78 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC8P31273 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC8P31273 MTCO3P15-201ENST00000526563 574 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXC8P31273 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXC8P31273 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC8P31273 AC069240.1-201ENST00000548774 375 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC8P31273 MTND4P33-201ENST00000556706 766 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AC023813.2-201ENST00000564321 469 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC8P31273 MTND3P13-201ENST00000574391 343 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXC8P31273 MIR4666A-201ENST00000580160 79 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AC004223.2-201ENST00000590309 544 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 MTND3P19-201ENST00000603825 345 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AC025588.2-201ENST00000604851 466 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AC092954.1-201ENST00000609121 445 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AP005137.2-201ENST00000609238 400 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AC092106.3-201ENST00000611308 722 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AP003485.2-201ENST00000623636 610 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AC055839.1-201ENST00000634467 498 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AC244258.1-201ENST00000637553 1071 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC8P31273 AC011266.1-201ENST00000624119 3569 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 OR11H5P-202ENST00000641612 1325 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 MTND4P10-201ENST00000446199 1363 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 AC097504.1-201ENST00000515103 2415 ntBASIC4.12□□□□□ -1.75
HOXC8P31273 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXC8P31273 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC8P31273 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC8P31273 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC8P31273 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC8P31273 PRO1804-201ENST00000623780 2050 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 SAGE4P-201ENST00000442271 3381 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC8P31273 RNU6-582P-201ENST00000362989 107 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 RNU6-921P-201ENST00000384361 107 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 RPL17P50-201ENST00000396131 546 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 AL136310.1-201ENST00000404926 654 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC8P31273 AL023807.1-201ENST00000407932 359 ntBASIC4.11□□□□□ -1.75
HOXC8P31273 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC8P31273 RPS7P15-201ENST00000415804 584 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms