Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC092436.1-201ENST00000506450 503 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.04□□□□□ -1.92
COL4A5P29400 AC245166.1-201ENST00000521012 253 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 OR8L1P-201ENST00000534005 955 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 TRAV37-201ENST00000553906 342 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 AC092184.1-201ENST00000625042 715 ntBASIC3.04□□□□□ -1.92
COL4A5P29400 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL4A5P29400 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL4A5P29400 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.03□□□□□ -1.92
COL4A5P29400 AC016717.2-201ENST00000609089 5141 ntBASIC3.03□□□□□ -1.92
COL4A5P29400 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
COL4A5P29400 AC004987.3-201ENST00000413879 771 ntBASIC3.03□□□□□ -1.92
COL4A5P29400 AC080125.1-201ENST00000414888 684 ntBASIC3.03□□□□□ -1.92
COL4A5P29400 VDAC1P3-201ENST00000434069 851 ntBASIC3.03□□□□□ -1.92
COL4A5P29400 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.03□□□□□ -1.92
COL4A5P29400 AC118282.1-201ENST00000506408 765 ntBASIC3.03□□□□□ -1.92
COL4A5P29400 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.03□□□□□ -1.92
COL4A5P29400 AC105036.1-201ENST00000566222 271 ntBASIC3.03□□□□□ -1.92
COL4A5P29400 MIR1273D-201ENST00000577266 86 ntBASIC3.03□□□□□ -1.92
COL4A5P29400 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.03□□□□□ -1.92
COL4A5P29400 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.03□□□□□ -1.92
COL4A5P29400 AL137072.1-201ENST00000603444 466 ntBASIC3.03□□□□□ -1.92
COL4A5P29400 CR381653.2-201ENST00000624041 768 ntBASIC3.03□□□□□ -1.92
COL4A5P29400 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.03□□□□□ -1.92
COL4A5P29400 AL353743.4-201ENST00000422653 1547 ntBASIC3.03□□□□□ -1.92
COL4A5P29400 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
COL4A5P29400 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.03□□□□□ -1.92
COL4A5P29400 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.03□□□□□ -1.93
COL4A5P29400 OR11H5P-202ENST00000641612 1325 ntBASIC3.03□□□□□ -1.93
COL4A5P29400 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.02□□□□□ -1.93
COL4A5P29400 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.02□□□□□ -1.93
COL4A5P29400 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.02□□□□□ -1.93
COL4A5P29400 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL4A5P29400 SNORD114-1-201ENST00000362705 72 ntBASIC3.02□□□□□ -1.93
COL4A5P29400 RNU6-76P-201ENST00000384060 104 ntBASIC3.02□□□□□ -1.93
COL4A5P29400 RN7SKP247-201ENST00000411094 308 ntBASIC3.02□□□□□ -1.93
COL4A5P29400 Z99127.2-201ENST00000441426 334 ntBASIC3.02□□□□□ -1.93
COL4A5P29400 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.02□□□□□ -1.93
COL4A5P29400 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.02□□□□□ -1.93
COL4A5P29400 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.02□□□□□ -1.93
COL4A5P29400 AC044913.1-201ENST00000557200 430 ntBASIC3.02□□□□□ -1.93
COL4A5P29400 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.02□□□□□ -1.93
COL4A5P29400 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.02□□□□□ -1.93
COL4A5P29400 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.02□□□□□ -1.93
COL4A5P29400 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.02□□□□□ -1.93
COL4A5P29400 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.02□□□□□ -1.93
COL4A5P29400 GTF2H2B-203ENST00000508065 1432 ntBASIC3.02□□□□□ -1.93
COL4A5P29400 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL4A5P29400 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
COL4A5P29400 AL606537.1-201ENST00000607258 2011 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 AL135786.1-201ENST00000415892 214 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.01□□□□□ -1.93
COL4A5P29400 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.01□□□□□ -1.93
COL4A5P29400 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.01□□□□□ -1.93
COL4A5P29400 AL138787.1-202ENST00000437804 898 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 SNRPFP2-201ENST00000440710 251 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 AL353705.4-201ENST00000449661 238 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 AC008280.2-201ENST00000455473 307 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 RN7SKP5-201ENST00000517045 272 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.01□□□□□ -1.93
COL4A5P29400 AC025946.2-201ENST00000603398 234 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 AC010680.4-201ENST00000605334 543 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 LINC00901.1-201ENST00000617252 152 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL4A5P29400 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL4A5P29400 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
COL4A5P29400 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL4A5P29400 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL4A5P29400 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL4A5P29400 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
COL4A5P29400 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
COL4A5P29400 MTND4P10-201ENST00000446199 1363 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.01□□□□□ -1.93
COL4A5P29400 AL024474.1-201ENST00000404655 591 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.01□□□□□ -1.93
COL4A5P29400 MTND4P2-201ENST00000507767 1203 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 AC009063.1-201ENST00000563342 702 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 U7.8-201ENST00000619968 63 ntBASIC3.01□□□□□ -1.93
COL4A5P29400 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
COL4A5P29400 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3□□□□□ -1.93
COL4A5P29400 AC069528.2-201ENST00000624849 1991 ntBASIC3□□□□□ -1.93
COL4A5P29400 RNU6-805P-201ENST00000365643 106 ntBASIC3□□□□□ -1.93
COL4A5P29400 MIR181B1-201ENST00000385240 110 ntBASIC3□□□□□ -1.93
COL4A5P29400 AC069218.2-201ENST00000411665 344 ntBASIC3□□□□□ -1.93
COL4A5P29400 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3□□□□□ -1.93
COL4A5P29400 PTP4A1P5-201ENST00000420305 455 ntBASIC3□□□□□ -1.93
COL4A5P29400 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3□□□□□ -1.93
COL4A5P29400 AC011816.1-201ENST00000441346 546 ntBASIC3□□□□□ -1.93
COL4A5P29400 FGF7P3-201ENST00000454645 303 ntBASIC3□□□□□ -1.93
COL4A5P29400 RPL30P9-201ENST00000465586 330 ntBASIC3□□□□□ -1.93
COL4A5P29400 AC025181.1-201ENST00000477507 416 ntBASIC3□□□□□ -1.93
COL4A5P29400 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3□□□□□ -1.93
COL4A5P29400 RPL36AP51-201ENST00000487216 318 ntBASIC3□□□□□ -1.93
COL4A5P29400 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL4A5P29400 SNORA31.1-201ENST00000515993 133 ntBASIC3□□□□□ -1.93
COL4A5P29400 SNORA31.5-201ENST00000516190 133 ntBASIC3□□□□□ -1.93
COL4A5P29400 SNORA9.3-201ENST00000516383 129 ntBASIC3□□□□□ -1.93
COL4A5P29400 AC122134.1-201ENST00000565664 1104 ntBASIC3□□□□□ -1.93
COL4A5P29400 SNORD39.2-201ENST00000579995 76 ntBASIC3□□□□□ -1.93
COL4A5P29400 AC046143.2-201ENST00000609789 160 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms