Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATF4P18848 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATF4P18848 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATF4P18848 OR52B3P-201ENST00000314715 928 ntBASIC4.98□□□□□ -1.61
ATF4P18848 RNA5SP321-201ENST00000362722 111 ntBASIC4.98□□□□□ -1.61
ATF4P18848 RNU4-20P-201ENST00000365601 151 ntBASIC4.98□□□□□ -1.61
ATF4P18848 Y_RNA.615-201ENST00000410769 117 ntBASIC4.98□□□□□ -1.61
ATF4P18848 GJA6P-201ENST00000415117 1042 ntBASIC4.98□□□□□ -1.61
ATF4P18848 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.98□□□□□ -1.61
ATF4P18848 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
ATF4P18848 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.98□□□□□ -1.61
ATF4P18848 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ATF4P18848 RPS7P14-201ENST00000426405 583 ntBASIC4.98□□□□□ -1.61
ATF4P18848 AC079780.1-201ENST00000428259 207 ntBASIC4.98□□□□□ -1.61
ATF4P18848 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.98□□□□□ -1.61
ATF4P18848 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.98□□□□□ -1.61
ATF4P18848 AL161722.2-201ENST00000434731 981 ntBASIC4.98□□□□□ -1.61
ATF4P18848 PCNPP2-201ENST00000441651 455 ntBASIC4.98□□□□□ -1.61
ATF4P18848 AL162388.1-201ENST00000450912 352 ntBASIC4.98□□□□□ -1.61
ATF4P18848 AC011225.1-201ENST00000457751 369 ntBASIC4.98□□□□□ -1.61
ATF4P18848 snoU13.24-201ENST00000458998 104 ntBASIC4.98□□□□□ -1.61
ATF4P18848 AC110792.1-201ENST00000491826 472 ntBASIC4.98□□□□□ -1.61
ATF4P18848 AC009567.2-201ENST00000502989 349 ntBASIC4.98□□□□□ -1.61
ATF4P18848 AC111000.3-201ENST00000508057 576 ntBASIC4.98□□□□□ -1.61
ATF4P18848 RNU6-1314P-201ENST00000517139 104 ntBASIC4.98□□□□□ -1.61
ATF4P18848 MRPS16P1-201ENST00000523462 412 ntBASIC4.98□□□□□ -1.61
ATF4P18848 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.98□□□□□ -1.61
ATF4P18848 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.98□□□□□ -1.61
ATF4P18848 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.98□□□□□ -1.61
ATF4P18848 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
ATF4P18848 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.98□□□□□ -1.61
ATF4P18848 PSMA3P-201ENST00000555485 635 ntBASIC4.98□□□□□ -1.61
ATF4P18848 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.98□□□□□ -1.61
ATF4P18848 MIR6885-201ENST00000612241 66 ntBASIC4.98□□□□□ -1.61
ATF4P18848 MIR6889-201ENST00000613185 59 ntBASIC4.98□□□□□ -1.61
ATF4P18848 MTND4P35-201ENST00000604257 1375 ntBASIC4.98□□□□□ -1.61
ATF4P18848 AC007938.2-201ENST00000604666 2634 ntBASIC4.98□□□□□ -1.61
ATF4P18848 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
ATF4P18848 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.98□□□□□ -1.61
ATF4P18848 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.98□□□□□ -1.61
ATF4P18848 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
ATF4P18848 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
ATF4P18848 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
ATF4P18848 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
ATF4P18848 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATF4P18848 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
ATF4P18848 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATF4P18848 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.97□□□□□ -1.61
ATF4P18848 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC4.97□□□□□ -1.61
ATF4P18848 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATF4P18848 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ATF4P18848 PRO1804-201ENST00000623780 2050 ntBASIC4.97□□□□□ -1.61
ATF4P18848 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATF4P18848 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.97□□□□□ -1.61
ATF4P18848 SNORD81.2-201ENST00000365153 76 ntBASIC4.97□□□□□ -1.61
ATF4P18848 Y_RNA.373-201ENST00000365600 103 ntBASIC4.97□□□□□ -1.61
ATF4P18848 RNU6-190P-201ENST00000384154 102 ntBASIC4.97□□□□□ -1.61
ATF4P18848 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ATF4P18848 RNA5SP111-201ENST00000411386 101 ntBASIC4.97□□□□□ -1.61
ATF4P18848 OR2AT2P-201ENST00000413438 905 ntBASIC4.97□□□□□ -1.61
ATF4P18848 AL359092.1-201ENST00000417156 265 ntBASIC4.97□□□□□ -1.61
ATF4P18848 KCTD9P3-201ENST00000434597 1169 ntBASIC4.97□□□□□ -1.61
ATF4P18848 IFNA20P-201ENST00000436840 528 ntBASIC4.97□□□□□ -1.61
ATF4P18848 AC007383.1-201ENST00000445875 636 ntBASIC4.97□□□□□ -1.61
ATF4P18848 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.97□□□□□ -1.61
ATF4P18848 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC4.97□□□□□ -1.61
ATF4P18848 YRDCP3-201ENST00000456507 480 ntBASIC4.97□□□□□ -1.61
ATF4P18848 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.97□□□□□ -1.61
ATF4P18848 HSPE1P6-201ENST00000479457 291 ntBASIC4.97□□□□□ -1.61
ATF4P18848 AC108860.1-201ENST00000484521 383 ntBASIC4.97□□□□□ -1.61
ATF4P18848 NIP7P2-201ENST00000485801 544 ntBASIC4.97□□□□□ -1.61
ATF4P18848 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.97□□□□□ -1.61
ATF4P18848 ENPP7P11-201ENST00000505915 627 ntBASIC4.97□□□□□ -1.61
ATF4P18848 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.97□□□□□ -1.61
ATF4P18848 AC117522.3-201ENST00000507974 584 ntBASIC4.97□□□□□ -1.61
ATF4P18848 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.97□□□□□ -1.61
ATF4P18848 IGKV2D-23-201ENST00000518179 286 ntBASIC4.97□□□□□ -1.61
ATF4P18848 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.97□□□□□ -1.61
ATF4P18848 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.97□□□□□ -1.61
ATF4P18848 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.97□□□□□ -1.61
ATF4P18848 AC109635.4-202ENST00000531666 412 ntBASIC4.97□□□□□ -1.61
ATF4P18848 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.97□□□□□ -1.61
ATF4P18848 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.97□□□□□ -1.61
ATF4P18848 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.97□□□□□ -1.61
ATF4P18848 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.97□□□□□ -1.61
ATF4P18848 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.97□□□□□ -1.61
ATF4P18848 AC138207.8-204ENST00000579588 527 ntBASIC4.97□□□□□ -1.61
ATF4P18848 MIR4424-201ENST00000585257 86 ntBASIC4.97□□□□□ -1.61
ATF4P18848 AC008521.1-201ENST00000587471 187 ntBASIC4.97□□□□□ -1.61
ATF4P18848 AC087763.1-201ENST00000603391 286 ntBASIC4.97□□□□□ -1.61
ATF4P18848 uc_338.5-201ENST00000611839 155 ntBASIC4.97□□□□□ -1.61
ATF4P18848 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
ATF4P18848 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.97□□□□□ -1.61
ATF4P18848 AL360181.4-201ENST00000621752 134 ntBASIC4.97□□□□□ -1.61
ATF4P18848 AL357559.1-201ENST00000622228 274 ntBASIC4.97□□□□□ -1.61
ATF4P18848 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATF4P18848 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC4.97□□□□□ -1.61
ATF4P18848 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ATF4P18848 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.97□□□□□ -1.61
ATF4P18848 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms