Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RNU4-27P-201ENST00000410889 139 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC4P09017 AC012065.2-201ENST00000421295 375 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC4P09017 AC006028.1-201ENST00000438379 402 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC4P09017 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC4P09017 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC4P09017 BX510359.1-201ENST00000456973 237 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 AC146507.1-201ENST00000468335 354 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 FCF1P3-201ENST00000496394 590 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 UBE2V1P12-201ENST00000503954 474 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC4P09017 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.29□□□□□ -1.88
HOXC4P09017 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC4P09017 AP003355.1-201ENST00000518956 587 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 AC004923.2-201ENST00000529649 369 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC4P09017 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC4P09017 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC4P09017 MIR5680-201ENST00000577577 84 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC4P09017 AC007687.1-201ENST00000602704 304 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 AC079880.2-201ENST00000603790 1213 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC4P09017 AL121652.1-201ENST00000608851 448 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 AC099778.2-201ENST00000610904 211 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 MIR8084-201ENST00000614105 89 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 SNORD39.4-201ENST00000620099 78 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC4P09017 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC4P09017 AC091152.2-201ENST00000591628 2569 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 AC005183.1-201ENST00000603687 1979 ntBASIC3.29□□□□□ -1.88
HOXC4P09017 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC4P09017 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC4P09017 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC4P09017 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC4P09017 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC4P09017 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HOXC4P09017 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
HOXC4P09017 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HOXC4P09017 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HOXC4P09017 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HOXC4P09017 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HOXC4P09017 DNAJC19P6-201ENST00000401853 280 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AL136116.1-201ENST00000403591 381 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 MIR1303-201ENST00000408625 86 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 XKRYP4-201ENST00000414395 483 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC4P09017 NUP35P2-201ENST00000416748 943 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 RPS15AP6-201ENST00000420703 385 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC4P09017 AC002075.2-201ENST00000425207 252 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AL158071.1-201ENST00000430315 461 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC4P09017 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC4P09017 AC004854.1-201ENST00000440356 349 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXC4P09017 RPS7P5-201ENST00000441482 581 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 RNFT1P2-201ENST00000443064 757 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 XKRYP5-201ENST00000449659 483 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 OFD1P3Y-201ENST00000453312 783 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 HMGB3P30-201ENST00000457863 606 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 SNRPGP3-201ENST00000469405 227 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC104689.1-201ENST00000473356 768 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 TRBV8-2-201ENST00000475637 270 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC021205.2-201ENST00000480069 347 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC118282.1-201ENST00000506408 765 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC4P09017 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 RN7SKP283-201ENST00000517197 270 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.28□□□□□ -1.88
HOXC4P09017 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC4P09017 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC4P09017 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC4P09017 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC4P09017 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC4P09017 AC005476.1-201ENST00000554427 397 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AL049838.1-201ENST00000563647 981 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 CYP2C60P-201ENST00000566088 139 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC090666.1-201ENST00000578241 445 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 MIR5004-201ENST00000579078 107 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC015917.1-201ENST00000579654 510 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXC4P09017 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC4P09017 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXC4P09017 AL606834.2-201ENST00000602954 668 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC011816.2-201ENST00000607089 556 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC112503.1-201ENST00000608436 391 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC009464.1-201ENST00000615731 469 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC018926.1-201ENST00000616335 435 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 AC099654.9-201ENST00000637055 678 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXC4P09017 AF127577.6-201ENST00000623352 2191 ntBASIC3.28□□□□□ -1.88
HOXC4P09017 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
HOXC4P09017 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
HOXC4P09017 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms