Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
SDC3O75056 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.55□□□□□ -1.84
SDC3O75056 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SDC3O75056 MCTS2P-201ENST00000394552 546 ntBASIC3.55□□□□□ -1.84
SDC3O75056 SFR1P1-201ENST00000403720 688 ntBASIC3.55□□□□□ -1.84
SDC3O75056 RNU2-37P-201ENST00000410695 177 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.55□□□□□ -1.84
SDC3O75056 USP9YP21-201ENST00000420603 432 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AC009237.2-201ENST00000421358 284 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AC233981.1-201ENST00000423224 461 ntBASIC3.55□□□□□ -1.84
SDC3O75056 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.55□□□□□ -1.84
SDC3O75056 IFNNP1-201ENST00000429219 553 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.55□□□□□ -1.84
SDC3O75056 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SDC3O75056 AC010655.1-201ENST00000449336 292 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AC006480.1-201ENST00000449887 378 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AC244505.3-201ENST00000454598 187 ntBASIC3.55□□□□□ -1.84
SDC3O75056 RNU7-170P-201ENST00000459303 61 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AC010307.1-201ENST00000467206 836 ntBASIC3.55□□□□□ -1.84
SDC3O75056 SYPL1P1-201ENST00000473622 768 ntBASIC3.55□□□□□ -1.84
SDC3O75056 TRBV12-2-201ENST00000489763 344 ntBASIC3.55□□□□□ -1.84
SDC3O75056 RPL7P47-201ENST00000497299 556 ntBASIC3.55□□□□□ -1.84
SDC3O75056 SETP14-201ENST00000497538 873 ntBASIC3.55□□□□□ -1.84
SDC3O75056 BTF3L4P4-201ENST00000506381 449 ntBASIC3.55□□□□□ -1.84
SDC3O75056 RANP9-201ENST00000519957 271 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AC104417.1-201ENST00000523974 751 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AP001207.1-201ENST00000524051 481 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.55□□□□□ -1.84
SDC3O75056 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.55□□□□□ -1.84
SDC3O75056 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.55□□□□□ -1.84
SDC3O75056 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.55□□□□□ -1.84
SDC3O75056 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.55□□□□□ -1.84
SDC3O75056 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.55□□□□□ -1.84
SDC3O75056 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.55□□□□□ -1.84
SDC3O75056 AC103710.3-201ENST00000608157 948 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AF129408.1-201ENST00000608767 431 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AC093673.2-201ENST00000609674 331 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AL355365.1-201ENST00000616480 294 ntBASIC3.55□□□□□ -1.84
SDC3O75056 U4.6-201ENST00000621618 127 ntBASIC3.55□□□□□ -1.84
SDC3O75056 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.55□□□□□ -1.84
SDC3O75056 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SDC3O75056 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SDC3O75056 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SDC3O75056 AC111188.2-201ENST00000529697 1387 ntBASIC3.54□□□□□ -1.84
SDC3O75056 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SDC3O75056 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SDC3O75056 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SDC3O75056 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SDC3O75056 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SDC3O75056 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SDC3O75056 RNU1-18P-201ENST00000363062 164 ntBASIC3.54□□□□□ -1.84
SDC3O75056 AL603865.2-201ENST00000401679 213 ntBASIC3.54□□□□□ -1.84
SDC3O75056 RNU6-575P-201ENST00000411326 105 ntBASIC3.54□□□□□ -1.84
SDC3O75056 Z92545.1-201ENST00000411782 234 ntBASIC3.54□□□□□ -1.84
SDC3O75056 RPS7P9-201ENST00000414704 586 ntBASIC3.54□□□□□ -1.84
SDC3O75056 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SDC3O75056 AL513174.1-201ENST00000423182 629 ntBASIC3.54□□□□□ -1.84
SDC3O75056 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.54□□□□□ -1.84
SDC3O75056 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.54□□□□□ -1.84
SDC3O75056 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.54□□□□□ -1.84
SDC3O75056 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.54□□□□□ -1.84
SDC3O75056 RPL7P59-201ENST00000447700 943 ntBASIC3.54□□□□□ -1.84
SDC3O75056 Z99714.1-201ENST00000450463 807 ntBASIC3.54□□□□□ -1.84
SDC3O75056 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.54□□□□□ -1.84
SDC3O75056 RN7SL93P-201ENST00000463035 293 ntBASIC3.54□□□□□ -1.84
SDC3O75056 RN7SL601P-201ENST00000471221 293 ntBASIC3.54□□□□□ -1.84
SDC3O75056 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.54□□□□□ -1.84
SDC3O75056 GAPDHP39-201ENST00000481866 979 ntBASIC3.54□□□□□ -1.84
SDC3O75056 AP001086.1-201ENST00000494882 321 ntBASIC3.54□□□□□ -1.84
SDC3O75056 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.54□□□□□ -1.84
SDC3O75056 AC021146.1-201ENST00000511202 716 ntBASIC3.54□□□□□ -1.84
SDC3O75056 RN7SKP116-201ENST00000516902 319 ntBASIC3.54□□□□□ -1.84
SDC3O75056 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.54□□□□□ -1.84
SDC3O75056 AL121766.1-201ENST00000547436 487 ntBASIC3.54□□□□□ -1.84
SDC3O75056 AC087897.1-201ENST00000550134 156 ntBASIC3.54□□□□□ -1.84
SDC3O75056 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.54□□□□□ -1.84
SDC3O75056 AC023161.2-201ENST00000551218 780 ntBASIC3.54□□□□□ -1.84
SDC3O75056 TRAV15-201ENST00000556680 249 ntBASIC3.54□□□□□ -1.84
SDC3O75056 NCAPGP2-201ENST00000557911 754 ntBASIC3.54□□□□□ -1.84
SDC3O75056 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.54□□□□□ -1.84
SDC3O75056 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.54□□□□□ -1.84
SDC3O75056 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.54□□□□□ -1.84
SDC3O75056 AC113368.1-201ENST00000603736 382 ntBASIC3.54□□□□□ -1.84
SDC3O75056 AC048347.1-201ENST00000624621 427 ntBASIC3.54□□□□□ -1.84
SDC3O75056 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.54□□□□□ -1.84
SDC3O75056 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.54□□□□□ -1.84
SDC3O75056 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.54□□□□□ -1.84
SDC3O75056 MIR3651-201ENST00000630427 90 ntBASIC3.54□□□□□ -1.84
SDC3O75056 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.54□□□□□ -1.84
SDC3O75056 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.54□□□□□ -1.84
SDC3O75056 ZNF734P-201ENST00000419494 1534 ntBASIC3.54□□□□□ -1.84
SDC3O75056 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SDC3O75056 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
SDC3O75056 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SDC3O75056 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
SDC3O75056 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SDC3O75056 MTND5P31-201ENST00000419366 1374 ntBASIC3.53□□□□□ -1.84
SDC3O75056 MTND4P9-201ENST00000507819 1346 ntBASIC3.53□□□□□ -1.84
SDC3O75056 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SDC3O75056 RNU6-600P-201ENST00000362524 99 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms