Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC007568.1-201ENST00000422912 471 ntBASIC5.72□□□□□ -1.49
SOX1O00570 OR4K11P-201ENST00000431829 904 ntBASIC5.72□□□□□ -1.49
SOX1O00570 AL359265.2-201ENST00000434367 631 ntBASIC5.72□□□□□ -1.49
SOX1O00570 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX1O00570 AL138799.3-201ENST00000438968 350 ntBASIC5.72□□□□□ -1.49
SOX1O00570 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX1O00570 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX1O00570 RNU6-333P-201ENST00000459117 107 ntBASIC5.72□□□□□ -1.49
SOX1O00570 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SOX1O00570 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX1O00570 AC021146.1-201ENST00000511202 716 ntBASIC5.72□□□□□ -1.49
SOX1O00570 RNA5SP464-201ENST00000516251 108 ntBASIC5.72□□□□□ -1.49
SOX1O00570 RNU6-794P-201ENST00000517261 64 ntBASIC5.72□□□□□ -1.49
SOX1O00570 RNU6-988P-201ENST00000519081 107 ntBASIC5.72□□□□□ -1.49
SOX1O00570 IGKV1-32-201ENST00000519290 311 ntBASIC5.72□□□□□ -1.49
SOX1O00570 RPL7P20-201ENST00000520308 745 ntBASIC5.72□□□□□ -1.49
SOX1O00570 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX1O00570 AC133555.2-201ENST00000550213 292 ntBASIC5.72□□□□□ -1.49
SOX1O00570 RPL21P12-201ENST00000559810 515 ntBASIC5.72□□□□□ -1.49
SOX1O00570 AC004817.2-201ENST00000561794 651 ntBASIC5.72□□□□□ -1.49
SOX1O00570 AC007224.1-201ENST00000564410 144 ntBASIC5.72□□□□□ -1.49
SOX1O00570 AC018552.3-201ENST00000567416 561 ntBASIC5.72□□□□□ -1.49
SOX1O00570 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX1O00570 OR4K8P-201ENST00000578842 1048 ntBASIC5.72□□□□□ -1.49
SOX1O00570 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.72□□□□□ -1.49
SOX1O00570 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX1O00570 CTHRC1P1-201ENST00000605383 469 ntBASIC5.72□□□□□ -1.49
SOX1O00570 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SOX1O00570 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX1O00570 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SOX1O00570 AC004972.1-201ENST00000623934 2209 ntBASIC5.72□□□□□ -1.49
SOX1O00570 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SOX1O00570 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
SOX1O00570 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SOX1O00570 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SOX1O00570 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SOX1O00570 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX1O00570 WBP11P1-201ENST00000562560 1931 ntBASIC5.72□□□□□ -1.49
SOX1O00570 AC007823.1-201ENST00000569932 1566 ntBASIC5.72□□□□□ -1.49
SOX1O00570 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.71□□□□□ -1.49
SOX1O00570 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SOX1O00570 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.71□□□□□ -1.49
SOX1O00570 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.71□□□□□ -1.49
SOX1O00570 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.71□□□□□ -1.49
SOX1O00570 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.71□□□□□ -1.49
SOX1O00570 AL353796.1-201ENST00000561542 3241 ntBASIC5.71□□□□□ -1.49
SOX1O00570 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SOX1O00570 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SOX1O00570 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SOX1O00570 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SOX1O00570 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SOX1O00570 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SOX1O00570 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SOX1O00570 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SOX1O00570 AL591135.1-201ENST00000401578 5914 ntBASIC5.71□□□□□ -1.5
SOX1O00570 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX1O00570 Y_RNA.28-201ENST00000362554 111 ntBASIC5.71□□□□□ -1.5
SOX1O00570 Y_RNA.31-201ENST00000362574 102 ntBASIC5.71□□□□□ -1.5
SOX1O00570 Y_RNA.367-201ENST00000365544 101 ntBASIC5.71□□□□□ -1.5
SOX1O00570 Y_RNA.530-201ENST00000384587 101 ntBASIC5.71□□□□□ -1.5
SOX1O00570 MIR454-201ENST00000390180 115 ntBASIC5.71□□□□□ -1.5
SOX1O00570 MTCYBP4-201ENST00000401524 249 ntBASIC5.71□□□□□ -1.5
SOX1O00570 RN7SKP151-201ENST00000410230 316 ntBASIC5.71□□□□□ -1.5
SOX1O00570 RNA5SP113-201ENST00000410486 84 ntBASIC5.71□□□□□ -1.5
SOX1O00570 Y_RNA.605-201ENST00000410577 105 ntBASIC5.71□□□□□ -1.5
SOX1O00570 RN7SKP235-201ENST00000410662 305 ntBASIC5.71□□□□□ -1.5
SOX1O00570 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX1O00570 AC092832.1-201ENST00000422934 400 ntBASIC5.71□□□□□ -1.5
SOX1O00570 AC007161.1-204ENST00000423039 460 ntBASIC5.71□□□□□ -1.5
SOX1O00570 PMCHL1-202ENST00000423102 261 ntBASIC5.71□□□□□ -1.5
SOX1O00570 AL732292.1-201ENST00000426692 226 ntBASIC5.71□□□□□ -1.5
SOX1O00570 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.71□□□□□ -1.5
SOX1O00570 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX1O00570 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX1O00570 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.71□□□□□ -1.5
SOX1O00570 AC104634.1-201ENST00000452720 462 ntBASIC5.71□□□□□ -1.5
SOX1O00570 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX1O00570 RN7SKP219-201ENST00000516825 296 ntBASIC5.71□□□□□ -1.5
SOX1O00570 AC022634.1-201ENST00000520765 532 ntBASIC5.71□□□□□ -1.5
SOX1O00570 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX1O00570 AC063950.1-201ENST00000552036 308 ntBASIC5.71□□□□□ -1.5
SOX1O00570 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX1O00570 MIR4503-201ENST00000582187 83 ntBASIC5.71□□□□□ -1.5
SOX1O00570 AC093227.2-201ENST00000589357 285 ntBASIC5.71□□□□□ -1.5
SOX1O00570 AL352984.2-202ENST00000613699 155 ntBASIC5.71□□□□□ -1.5
SOX1O00570 uc_338.12-201ENST00000616344 181 ntBASIC5.71□□□□□ -1.5
SOX1O00570 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SOX1O00570 uc_338.22-201ENST00000622722 187 ntBASIC5.71□□□□□ -1.5
SOX1O00570 AL359757.2-201ENST00000624309 274 ntBASIC5.71□□□□□ -1.5
SOX1O00570 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.71□□□□□ -1.5
SOX1O00570 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SOX1O00570 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX1O00570 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX1O00570 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX1O00570 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SOX1O00570 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX1O00570 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.71□□□□□ -1.5
SOX1O00570 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SOX1O00570 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SOX1O00570 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms