Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 CENPUP2-201ENST00000555897 1186 ntBASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AC079075.1-201ENST00000559543 878 ntBASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AC018552.3-201ENST00000567416 561 ntBASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AC110743.1-201ENST00000584870 478 ntBASIC5.22□□□□□ -1.57
CCDC66A2RUB6 MIR4443-201ENST00000585052 53 ntBASIC5.22□□□□□ -1.57
CCDC66A2RUB6 HMGN1P30-201ENST00000589286 268 ntBASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AL512329.2-201ENST00000607350 548 ntBASIC5.22□□□□□ -1.57
CCDC66A2RUB6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AC211433.2-201ENST00000608433 387 ntBASIC5.22□□□□□ -1.57
CCDC66A2RUB6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AC099654.14-201ENST00000638599 341 ntBASIC5.22□□□□□ -1.57
CCDC66A2RUB6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AL451142.2-201ENST00000429076 2090 ntBASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AC027290.2-201ENST00000623210 18662 ntBASIC5.22□□□□□ -1.57
CCDC66A2RUB6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC66A2RUB6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
CCDC66A2RUB6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.21□□□□□ -1.57
CCDC66A2RUB6 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 RNU6-343P-201ENST00000364709 104 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 Y_RNA.303-201ENST00000364998 94 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 RNU1-43P-201ENST00000365052 165 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 RNU6-171P-201ENST00000384354 107 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 SNORA70.10-201ENST00000384515 134 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 RPS20P2-201ENST00000402520 389 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 RPS3AP24-201ENST00000407896 734 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC069218.2-201ENST00000411665 344 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 DDX39BP1-205ENST00000422507 192 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 EIF4HP2-201ENST00000424380 563 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 USP9YP36-201ENST00000424581 829 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 RPEP2-201ENST00000432149 701 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 RPL17P49-201ENST00000443728 411 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC239809.1-201ENST00000450470 217 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 MTCO3P20-201ENST00000454926 688 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 APOOP2-201ENST00000461561 539 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 MTND1P3-201ENST00000484956 952 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 RPS21P4-201ENST00000487122 248 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC013356.1-201ENST00000489027 564 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AP001025.2-201ENST00000490908 477 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 OR5M14P-201ENST00000506803 618 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC006390.1-201ENST00000508068 283 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC104057.1-201ENST00000515547 497 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 RN7SKP260-201ENST00000516907 149 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 RNU6-528P-201ENST00000516926 100 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 RNU2-46P-201ENST00000517038 113 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 Y_RNA.719-201ENST00000517156 106 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AP001893.2-201ENST00000526949 202 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC034268.2-201ENST00000571784 482 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 CKS1BP3-201ENST00000600888 237 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC011451.2-201ENST00000604303 598 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AL590282.1-201ENST00000610379 1136 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AL049794.2-201ENST00000616301 365 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 MIR6864-201ENST00000617935 70 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 MIR6719-201ENST00000622428 87 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 ASNSP1-201ENST00000518311 1939 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 AC130650.2-201ENST00000618736 2403 ntBASIC5.21□□□□□ -1.58
CCDC66A2RUB6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC66A2RUB6 PABPC1P6-201ENST00000445594 1829 ntBASIC5.2□□□□□ -1.58
CCDC66A2RUB6 AC090971.4-201ENST00000560291 1800 ntBASIC5.2□□□□□ -1.58
CCDC66A2RUB6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC66A2RUB6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC66A2RUB6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms