Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC24.27■■□□□ 1.48
RTCBQ9Y3I0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTCBQ9Y3I0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC24.27■■□□□ 1.48
RTCBQ9Y3I0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24.27■■□□□ 1.48
RTCBQ9Y3I0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.27■■□□□ 1.48
RTCBQ9Y3I0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
RTCBQ9Y3I0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
RTCBQ9Y3I0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTCBQ9Y3I0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC24.27■■□□□ 1.48
RTCBQ9Y3I0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 AC024243.1-201ENST00000609234 778 ntBASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
RTCBQ9Y3I0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC24.25■■□□□ 1.47
RTCBQ9Y3I0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 NUS1P1-201ENST00000446295 882 ntBASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 AP002414.4-201ENST00000589764 1148 ntBASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTCBQ9Y3I0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 AL691432.2-201ENST00000607222 2038 ntBASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 AC020907.5-201ENST00000624372 1936 ntBASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RTCBQ9Y3I0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms