Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 TSSC2-201ENST00000450217 709 ntBASIC18.17■□□□□ 0.5
LHX6Q9UPM6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 AL355385.1-201ENST00000606123 409 ntBASIC18.17■□□□□ 0.5
LHX6Q9UPM6 AL023803.3-201ENST00000615559 522 ntBASIC18.17■□□□□ 0.5
LHX6Q9UPM6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 HLA-G-202ENST00000376815 851 ntBASIC18.16■□□□□ 0.5
LHX6Q9UPM6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 AP000523.1-201ENST00000398242 1049 ntBASIC18.16■□□□□ 0.5
LHX6Q9UPM6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 AL590627.1-203ENST00000421194 1026 ntBASIC18.16■□□□□ 0.5
LHX6Q9UPM6 AP002469.2-201ENST00000531724 424 ntBASIC18.16■□□□□ 0.5
LHX6Q9UPM6 AL353719.1-201ENST00000566847 864 ntBASIC18.16■□□□□ 0.5
LHX6Q9UPM6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 AL732292.2-201ENST00000609649 430 ntBASIC18.16■□□□□ 0.5
LHX6Q9UPM6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 PTBP1P-201ENST00000554374 1601 ntBASIC18.16■□□□□ 0.5
LHX6Q9UPM6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.16■□□□□ 0.5
LHX6Q9UPM6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 Z98882.1-201ENST00000622160 2253 ntBASIC18.15■□□□□ 0.5
LHX6Q9UPM6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.15■□□□□ 0.5
LHX6Q9UPM6 RN7SL832P-201ENST00000607781 1756 ntBASIC18.14■□□□□ 0.5
LHX6Q9UPM6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
LHX6Q9UPM6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 STARP1-201ENST00000397973 869 ntBASIC18.14■□□□□ 0.49
LHX6Q9UPM6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 AC008040.2-201ENST00000461049 708 ntBASIC18.14■□□□□ 0.49
LHX6Q9UPM6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 AF228730.7-201ENST00000641842 219 ntBASIC18.14■□□□□ 0.49
LHX6Q9UPM6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LHX6Q9UPM6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 AC026310.3-201ENST00000625186 2373 ntBASIC18.13■□□□□ 0.49
LHX6Q9UPM6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms