Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB4Q9UN71 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 AL032819.2-201ENST00000624543 2162 ntBASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 AL390719.1-204ENST00000412397 1219 ntBASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 AL137784.2-201ENST00000607332 1000 ntBASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 AC073111.5-205ENST00000641717 521 ntBASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB4Q9UN71 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
PCDHGB4Q9UN71 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 GPX1P1-201ENST00000388829 606 ntBASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 BX276092.2-201ENST00000417668 665 ntBASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 AC026185.1-201ENST00000445748 174 ntBASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms