Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 AC005082.1-201ENST00000413042 2259 ntBASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 AC079598.2-202ENST00000546624 1451 ntBASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 AC092368.3-202ENST00000574180 1591 ntBASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 AL137784.2-201ENST00000607332 1000 ntBASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN11Q9UMQ6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 GUSBP6-202ENST00000438529 1198 ntBASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 MYC-209ENST00000641252 345 ntBASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.78■□□□□ 0.92
CAPN11Q9UMQ6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 TUBB8P6-201ENST00000436895 1288 ntBASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 AC120498.8-201ENST00000614275 531 ntBASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN11Q9UMQ6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.77■□□□□ 0.91
CAPN11Q9UMQ6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CAPN11Q9UMQ6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 AL121829.2-201ENST00000620908 328 ntBASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 AL390961.4-201ENST00000623958 2535 ntBASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms