Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 KSR1P1-201ENST00000446298 240 ntBASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 AP002982.1-201ENST00000492365 877 ntBASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 AC073195.1-201ENST00000607241 877 ntBASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 AL445675.2-201ENST00000620291 557 ntBASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 HLA-A-209ENST00000638375 975 ntBASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
PPARGC1AQ9UBK2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PPARGC1AQ9UBK2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PPARGC1AQ9UBK2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PPARGC1AQ9UBK2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 AL158211.5-201ENST00000623583 2518 ntBASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 AC066615.1-201ENST00000640911 628 ntBASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.01■□□□□ 0.79
PPARGC1AQ9UBK2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 SAPCD2P4-201ENST00000424595 1171 ntBASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 DET1-205ENST00000558413 583 ntTSL 4 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 PWWP2AP1-201ENST00000429776 2273 ntBASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPARGC1AQ9UBK2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 AL049637.2-201ENST00000641778 930 ntBASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.99■□□□□ 0.79
PPARGC1AQ9UBK2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 RPS2P4-201ENST00000476944 856 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms