Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 AC011484.1-201ENST00000377652 1995 ntBASIC22.02■■□□□ 1.12
RNF216Q9NWF9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 WBP1LP6-201ENST00000438434 424 ntBASIC22.02■■□□□ 1.12
RNF216Q9NWF9 MTATP6P26-201ENST00000445926 662 ntBASIC22.02■■□□□ 1.12
RNF216Q9NWF9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 AC023632.3-201ENST00000521633 145 ntBASIC22.02■■□□□ 1.12
RNF216Q9NWF9 AP003716.1-203ENST00000533670 613 ntTSL 3 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 RARRES2P10-201ENST00000564312 460 ntBASIC22.02■■□□□ 1.12
RNF216Q9NWF9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
RNF216Q9NWF9 AC131649.1-201ENST00000569215 1313 ntBASIC22.02■■□□□ 1.12
RNF216Q9NWF9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.02■■□□□ 1.11
RNF216Q9NWF9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.02■■□□□ 1.11
RNF216Q9NWF9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RNF216Q9NWF9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 KRASP1-201ENST00000407852 552 ntBASIC22.01■■□□□ 1.11
RNF216Q9NWF9 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 AL133417.1-201ENST00000425290 688 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 AC104629.2-201ENST00000468627 598 ntBASIC22.01■■□□□ 1.11
RNF216Q9NWF9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 AC025437.4-201ENST00000522975 681 ntTSL 3 BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 AP003168.1-201ENST00000530091 307 ntBASIC22.01■■□□□ 1.11
RNF216Q9NWF9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 LINC01571-201ENST00000563603 811 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 AC063944.3-201ENST00000609969 533 ntBASIC22.01■■□□□ 1.11
RNF216Q9NWF9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 REXO1L12P-201ENST00000622156 912 ntBASIC22.01■■□□□ 1.11
RNF216Q9NWF9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF216Q9NWF9 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF216Q9NWF9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RNF216Q9NWF9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF216Q9NWF9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22■■□□□ 1.11
RNF216Q9NWF9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RNF216Q9NWF9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22■■□□□ 1.11
RNF216Q9NWF9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF216Q9NWF9 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC22■■□□□ 1.11
RNF216Q9NWF9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF216Q9NWF9 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC22■■□□□ 1.11
RNF216Q9NWF9 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF216Q9NWF9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RNF216Q9NWF9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22■■□□□ 1.11
RNF216Q9NWF9 AC021269.1-201ENST00000526860 705 ntBASIC22■■□□□ 1.11
RNF216Q9NWF9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22■■□□□ 1.11
RNF216Q9NWF9 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC22■■□□□ 1.11
RNF216Q9NWF9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
RNF216Q9NWF9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22■■□□□ 1.11
RNF216Q9NWF9 MIR4785-201ENST00000585005 73 ntBASIC22■■□□□ 1.11
RNF216Q9NWF9 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC22■■□□□ 1.11
RNF216Q9NWF9 AC007224.2-201ENST00000625011 510 ntBASIC22■■□□□ 1.11
RNF216Q9NWF9 AL049637.2-201ENST00000641778 930 ntBASIC22■■□□□ 1.11
RNF216Q9NWF9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RNF216Q9NWF9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF216Q9NWF9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF216Q9NWF9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22■■□□□ 1.11
RNF216Q9NWF9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF216Q9NWF9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF216Q9NWF9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF216Q9NWF9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF216Q9NWF9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF216Q9NWF9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF216Q9NWF9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF216Q9NWF9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF216Q9NWF9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF216Q9NWF9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
RNF216Q9NWF9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RNF216Q9NWF9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF216Q9NWF9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF216Q9NWF9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF216Q9NWF9 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms