Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TLR9Q9NR96 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.4■□□□□ 0.86
TLR9Q9NR96 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.4■□□□□ 0.86
TLR9Q9NR96 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TLR9Q9NR96 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TLR9Q9NR96 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.4■□□□□ 0.86
TLR9Q9NR96 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TLR9Q9NR96 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TLR9Q9NR96 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TLR9Q9NR96 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TLR9Q9NR96 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TLR9Q9NR96 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TLR9Q9NR96 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
TLR9Q9NR96 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TLR9Q9NR96 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TLR9Q9NR96 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TLR9Q9NR96 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
TLR9Q9NR96 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.39■□□□□ 0.86
TLR9Q9NR96 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TLR9Q9NR96 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.39■□□□□ 0.85
TLR9Q9NR96 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.39■□□□□ 0.85
TLR9Q9NR96 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TLR9Q9NR96 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TLR9Q9NR96 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TLR9Q9NR96 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TLR9Q9NR96 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.39■□□□□ 0.85
TLR9Q9NR96 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.39■□□□□ 0.85
TLR9Q9NR96 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TLR9Q9NR96 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TLR9Q9NR96 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TLR9Q9NR96 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.39■□□□□ 0.85
TLR9Q9NR96 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TLR9Q9NR96 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
TLR9Q9NR96 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TLR9Q9NR96 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TLR9Q9NR96 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TLR9Q9NR96 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TLR9Q9NR96 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 SPDYE15P-201ENST00000424157 909 ntBASIC20.38■□□□□ 0.85
TLR9Q9NR96 ATP5G2P1-201ENST00000433580 426 ntBASIC20.38■□□□□ 0.85
TLR9Q9NR96 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.38■□□□□ 0.85
TLR9Q9NR96 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.38■□□□□ 0.85
TLR9Q9NR96 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.38■□□□□ 0.85
TLR9Q9NR96 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.38■□□□□ 0.85
TLR9Q9NR96 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.38■□□□□ 0.85
TLR9Q9NR96 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TLR9Q9NR96 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.38■□□□□ 0.85
TLR9Q9NR96 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TLR9Q9NR96 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.38■□□□□ 0.85
TLR9Q9NR96 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TLR9Q9NR96 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TLR9Q9NR96 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TLR9Q9NR96 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 AC012313.10-201ENST00000623509 926 ntBASIC20.37■□□□□ 0.85
TLR9Q9NR96 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TLR9Q9NR96 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TLR9Q9NR96 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TLR9Q9NR96 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TLR9Q9NR96 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TLR9Q9NR96 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
TLR9Q9NR96 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.36■□□□□ 0.85
TLR9Q9NR96 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TLR9Q9NR96 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.36■□□□□ 0.85
TLR9Q9NR96 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.36■□□□□ 0.85
TLR9Q9NR96 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.36■□□□□ 0.85
TLR9Q9NR96 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.36■□□□□ 0.85
TLR9Q9NR96 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.36■□□□□ 0.85
TLR9Q9NR96 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.36■□□□□ 0.85
TLR9Q9NR96 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TLR9Q9NR96 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms