Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 TSPY17P-201ENST00000450329 467 ntBASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 AL512604.3-201ENST00000569583 964 ntBASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.56■■□□□ 1.04
PDLIM7Q9NR12 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 PRSS44-201ENST00000515154 1146 ntBASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 AL353719.1-201ENST00000566847 864 ntBASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 AC140113.3-201ENST00000605663 199 ntBASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM7Q9NR12 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 VENTXP5-201ENST00000523979 775 ntBASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
PDLIM7Q9NR12 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms