Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 AC080038.1-201ENST00000611274 1154 ntBASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHACTR1Q9C0D0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 AL390961.4-201ENST00000623958 2535 ntBASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 DUSP5P2-201ENST00000426873 1033 ntBASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PHACTR1Q9C0D0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 MIPEPP3-201ENST00000412105 444 ntBASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 AC006557.6-201ENST00000623071 864 ntBASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PHACTR1Q9C0D0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHACTR1Q9C0D0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms