Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 AC010203.1-204ENST00000548782 407 ntBASIC19.67■□□□□ 0.74
CIPCQ9C0C6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.67■□□□□ 0.74
CIPCQ9C0C6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CIPCQ9C0C6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CIPCQ9C0C6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CIPCQ9C0C6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CIPCQ9C0C6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.67■□□□□ 0.74
CIPCQ9C0C6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CIPCQ9C0C6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 CCR12P-201ENST00000446203 998 ntBASIC19.66■□□□□ 0.74
CIPCQ9C0C6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 AC116562.4-202ENST00000641738 218 ntBASIC19.66■□□□□ 0.74
CIPCQ9C0C6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.66■□□□□ 0.74
CIPCQ9C0C6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.66■□□□□ 0.74
CIPCQ9C0C6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CIPCQ9C0C6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.64■□□□□ 0.74
CIPCQ9C0C6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CIPCQ9C0C6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 FAM87A-204ENST00000613235 858 ntBASIC19.64■□□□□ 0.73
CIPCQ9C0C6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 AC073508.3-201ENST00000619697 1419 ntBASIC19.64■□□□□ 0.73
CIPCQ9C0C6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 KRT8P41-201ENST00000533985 1514 ntBASIC19.64■□□□□ 0.73
CIPCQ9C0C6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
CIPCQ9C0C6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 SLC25A1P2-201ENST00000430693 912 ntBASIC19.63■□□□□ 0.73
CIPCQ9C0C6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 AL445228.2-201ENST00000605589 952 ntBASIC19.63■□□□□ 0.73
CIPCQ9C0C6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CIPCQ9C0C6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms