Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC027796.2-201ENST00000575326 344 ntBASIC19.43■□□□□ 0.7
PHOX2BQ99453 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHOX2BQ99453 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.43■□□□□ 0.7
PHOX2BQ99453 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHOX2BQ99453 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHOX2BQ99453 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHOX2BQ99453 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.43■□□□□ 0.7
PHOX2BQ99453 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHOX2BQ99453 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 AP003041.3-201ENST00000527151 707 ntBASIC19.42■□□□□ 0.7
PHOX2BQ99453 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.42■□□□□ 0.7
PHOX2BQ99453 AL121672.3-201ENST00000608644 468 ntBASIC19.42■□□□□ 0.7
PHOX2BQ99453 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHOX2BQ99453 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.41■□□□□ 0.7
PHOX2BQ99453 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 HBZP1-201ENST00000354915 429 ntBASIC19.41■□□□□ 0.7
PHOX2BQ99453 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PHOX2BQ99453 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.41■□□□□ 0.7
PHOX2BQ99453 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.41■□□□□ 0.7
PHOX2BQ99453 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
PHOX2BQ99453 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.41■□□□□ 0.7
PHOX2BQ99453 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PHOX2BQ99453 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PHOX2BQ99453 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 IL9RP2-201ENST00000423948 1312 ntBASIC19.41■□□□□ 0.7
PHOX2BQ99453 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.41■□□□□ 0.7
PHOX2BQ99453 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.41■□□□□ 0.7
PHOX2BQ99453 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHOX2BQ99453 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PHOX2BQ99453 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHOX2BQ99453 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHOX2BQ99453 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHOX2BQ99453 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHOX2BQ99453 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHOX2BQ99453 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHOX2BQ99453 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHOX2BQ99453 MIR564-202ENST00000385049 94 ntBASIC19.4■□□□□ 0.7
PHOX2BQ99453 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHOX2BQ99453 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 FOSL1P1-201ENST00000511041 816 ntBASIC19.4■□□□□ 0.7
PHOX2BQ99453 POLD2P1-201ENST00000511220 997 ntBASIC19.4■□□□□ 0.7
PHOX2BQ99453 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHOX2BQ99453 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHOX2BQ99453 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 AC011498.5-201ENST00000592027 486 ntBASIC19.4■□□□□ 0.7
PHOX2BQ99453 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHOX2BQ99453 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PHOX2BQ99453 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PHOX2BQ99453 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHOX2BQ99453 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHOX2BQ99453 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.39■□□□□ 0.69
PHOX2BQ99453 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHOX2BQ99453 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHOX2BQ99453 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms