Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ALPK3Q96L96 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.01■□□□□ 0.95
ALPK3Q96L96 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.01■□□□□ 0.95
ALPK3Q96L96 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.01■□□□□ 0.95
ALPK3Q96L96 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ALPK3Q96L96 PLK5-205ENST00000642079 1969 ntBASIC21.01■□□□□ 0.95
ALPK3Q96L96 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALPK3Q96L96 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALPK3Q96L96 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21■□□□□ 0.95
ALPK3Q96L96 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ALPK3Q96L96 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21■□□□□ 0.95
ALPK3Q96L96 AF238378.1-201ENST00000526806 358 ntBASIC21■□□□□ 0.95
ALPK3Q96L96 AL136038.4-201ENST00000603606 1261 ntBASIC21■□□□□ 0.95
ALPK3Q96L96 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALPK3Q96L96 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21■□□□□ 0.95
ALPK3Q96L96 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALPK3Q96L96 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21■□□□□ 0.95
ALPK3Q96L96 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21■□□□□ 0.95
ALPK3Q96L96 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALPK3Q96L96 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21■□□□□ 0.95
ALPK3Q96L96 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21■□□□□ 0.95
ALPK3Q96L96 AP001271.2-201ENST00000624018 1556 ntBASIC21■□□□□ 0.95
ALPK3Q96L96 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
ALPK3Q96L96 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALPK3Q96L96 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ALPK3Q96L96 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21■□□□□ 0.95
ALPK3Q96L96 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALPK3Q96L96 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21■□□□□ 0.95
ALPK3Q96L96 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21■□□□□ 0.95
ALPK3Q96L96 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALPK3Q96L96 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALPK3Q96L96 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALPK3Q96L96 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALPK3Q96L96 FAM220CP-201ENST00000395253 831 ntBASIC20.99■□□□□ 0.95
ALPK3Q96L96 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.99■□□□□ 0.95
ALPK3Q96L96 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALPK3Q96L96 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALPK3Q96L96 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ALPK3Q96L96 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALPK3Q96L96 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.98■□□□□ 0.95
ALPK3Q96L96 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.98■□□□□ 0.95
ALPK3Q96L96 AC024243.1-201ENST00000609234 778 ntBASIC20.98■□□□□ 0.95
ALPK3Q96L96 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALPK3Q96L96 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.98■□□□□ 0.95
ALPK3Q96L96 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ALPK3Q96L96 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ALPK3Q96L96 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ALPK3Q96L96 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ALPK3Q96L96 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALPK3Q96L96 GPAT2P1-201ENST00000444924 1672 ntBASIC20.98■□□□□ 0.95
ALPK3Q96L96 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALPK3Q96L96 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALPK3Q96L96 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ALPK3Q96L96 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALPK3Q96L96 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALPK3Q96L96 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ALPK3Q96L96 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.98■□□□□ 0.95
ALPK3Q96L96 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.98■□□□□ 0.95
ALPK3Q96L96 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.98■□□□□ 0.95
ALPK3Q96L96 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALPK3Q96L96 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALPK3Q96L96 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALPK3Q96L96 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALPK3Q96L96 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ALPK3Q96L96 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.97■□□□□ 0.95
ALPK3Q96L96 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.97■□□□□ 0.95
ALPK3Q96L96 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.97■□□□□ 0.95
ALPK3Q96L96 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.97■□□□□ 0.95
ALPK3Q96L96 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ALPK3Q96L96 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALPK3Q96L96 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALPK3Q96L96 MIR662-201ENST00000384847 95 ntBASIC20.96■□□□□ 0.95
ALPK3Q96L96 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.96■□□□□ 0.95
ALPK3Q96L96 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ALPK3Q96L96 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms