Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 TSPY21P-201ENST00000433481 731 ntBASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 CKBP1-201ENST00000565489 1086 ntBASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 AC012306.2-201ENST00000609350 630 ntBASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 AC010947.1-201ENST00000623454 693 ntBASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SMARCD1Q96GM5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 AC145285.6-201ENST00000604632 637 ntBASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SMARCD1Q96GM5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 TSPY23P-201ENST00000440136 739 ntBASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCD1Q96GM5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 LINC01568-207ENST00000641790 1380 ntBASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SMARCD1Q96GM5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 TSPY14P-201ENST00000303979 915 ntBASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 EGLN1P1-201ENST00000531623 762 ntBASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCD1Q96GM5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms