Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFT43Q96FT9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFT43Q96FT9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFT43Q96FT9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFT43Q96FT9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFT43Q96FT9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFT43Q96FT9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFT43Q96FT9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFT43Q96FT9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFT43Q96FT9 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.79■□□□□ 0.76
IFT43Q96FT9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IFT43Q96FT9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IFT43Q96FT9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFT43Q96FT9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.79■□□□□ 0.76
IFT43Q96FT9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFT43Q96FT9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFT43Q96FT9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFT43Q96FT9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFT43Q96FT9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFT43Q96FT9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFT43Q96FT9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFT43Q96FT9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IFT43Q96FT9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.78■□□□□ 0.76
IFT43Q96FT9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFT43Q96FT9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.77■□□□□ 0.76
IFT43Q96FT9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFT43Q96FT9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IFT43Q96FT9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFT43Q96FT9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFT43Q96FT9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFT43Q96FT9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFT43Q96FT9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.77■□□□□ 0.76
IFT43Q96FT9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFT43Q96FT9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFT43Q96FT9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IFT43Q96FT9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFT43Q96FT9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.77■□□□□ 0.76
IFT43Q96FT9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.77■□□□□ 0.76
IFT43Q96FT9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.77■□□□□ 0.76
IFT43Q96FT9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.77■□□□□ 0.76
IFT43Q96FT9 MIR4785-201ENST00000585005 73 ntBASIC19.77■□□□□ 0.76
IFT43Q96FT9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
IFT43Q96FT9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFT43Q96FT9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.77■□□□□ 0.76
IFT43Q96FT9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
IFT43Q96FT9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
IFT43Q96FT9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.77■□□□□ 0.76
IFT43Q96FT9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.77■□□□□ 0.76
IFT43Q96FT9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFT43Q96FT9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.75
IFT43Q96FT9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
IFT43Q96FT9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IFT43Q96FT9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IFT43Q96FT9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IFT43Q96FT9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IFT43Q96FT9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IFT43Q96FT9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IFT43Q96FT9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 NBPF21P-201ENST00000425093 1451 ntBASIC19.76■□□□□ 0.75
IFT43Q96FT9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 REXO1L12P-201ENST00000622156 912 ntBASIC19.76■□□□□ 0.75
IFT43Q96FT9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
IFT43Q96FT9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
IFT43Q96FT9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms