Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 AL031985.4-201ENST00000642138 673 ntBASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 BCL2-203ENST00000589955 5011 ntBASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 AC211429.1-201ENST00000415277 523 ntBASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 AL445675.2-201ENST00000620291 557 ntBASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3KBP1Q96B97 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 UNC93B2-201ENST00000285383 730 ntBASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3KBP1Q96B97 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SH3KBP1Q96B97 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 AL158211.5-201ENST00000623583 2518 ntBASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 MMP23A-201ENST00000234610 1017 ntBASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 AC116562.2-201ENST00000507042 360 ntBASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 AC026271.3-201ENST00000571884 352 ntBASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.01■□□□□ 0.63
SH3KBP1Q96B97 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SH3KBP1Q96B97 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SH3KBP1Q96B97 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19■□□□□ 0.63
SH3KBP1Q96B97 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19■□□□□ 0.63
SH3KBP1Q96B97 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SH3KBP1Q96B97 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19■□□□□ 0.63
SH3KBP1Q96B97 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SH3KBP1Q96B97 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19■□□□□ 0.63
SH3KBP1Q96B97 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SH3KBP1Q96B97 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19■□□□□ 0.63
SH3KBP1Q96B97 AC087499.1-201ENST00000418141 1075 ntBASIC19■□□□□ 0.63
SH3KBP1Q96B97 ECEL1P3-201ENST00000427961 737 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms