Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
SSH3Q8TE77 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SSH3Q8TE77 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SSH3Q8TE77 CKBP1-201ENST00000565489 1086 ntBASIC23.78■■□□□ 1.4
SSH3Q8TE77 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SSH3Q8TE77 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
SSH3Q8TE77 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.78■■□□□ 1.4
SSH3Q8TE77 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SSH3Q8TE77 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SSH3Q8TE77 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SSH3Q8TE77 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SSH3Q8TE77 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.77■■□□□ 1.4
SSH3Q8TE77 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SSH3Q8TE77 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SSH3Q8TE77 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SSH3Q8TE77 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
SSH3Q8TE77 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.77■■□□□ 1.4
SSH3Q8TE77 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.77■■□□□ 1.4
SSH3Q8TE77 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SSH3Q8TE77 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.77■■□□□ 1.4
SSH3Q8TE77 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.77■■□□□ 1.4
SSH3Q8TE77 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.77■■□□□ 1.4
SSH3Q8TE77 PRSS44-201ENST00000515154 1146 ntBASIC23.77■■□□□ 1.4
SSH3Q8TE77 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SSH3Q8TE77 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.77■■□□□ 1.4
SSH3Q8TE77 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.77■■□□□ 1.4
SSH3Q8TE77 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SSH3Q8TE77 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SSH3Q8TE77 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SSH3Q8TE77 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SSH3Q8TE77 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.77■■□□□ 1.4
SSH3Q8TE77 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SSH3Q8TE77 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
SSH3Q8TE77 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.76■■□□□ 1.39
SSH3Q8TE77 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.76■■□□□ 1.39
SSH3Q8TE77 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.76■■□□□ 1.39
SSH3Q8TE77 IRX1P1-201ENST00000438849 1838 ntBASIC23.76■■□□□ 1.39
SSH3Q8TE77 UNC93B2-201ENST00000285383 730 ntBASIC23.76■■□□□ 1.39
SSH3Q8TE77 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SSH3Q8TE77 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.76■■□□□ 1.39
SSH3Q8TE77 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.76■■□□□ 1.39
SSH3Q8TE77 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
SSH3Q8TE77 AP000525.1-201ENST00000608286 694 ntBASIC23.76■■□□□ 1.39
SSH3Q8TE77 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SSH3Q8TE77 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.75■■□□□ 1.39
SSH3Q8TE77 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SSH3Q8TE77 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SSH3Q8TE77 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SSH3Q8TE77 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.75■■□□□ 1.39
SSH3Q8TE77 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SSH3Q8TE77 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SSH3Q8TE77 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SSH3Q8TE77 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SSH3Q8TE77 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SSH3Q8TE77 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.75■■□□□ 1.39
SSH3Q8TE77 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.75■■□□□ 1.39
SSH3Q8TE77 AC097488.1-201ENST00000507834 756 ntBASIC23.75■■□□□ 1.39
SSH3Q8TE77 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SSH3Q8TE77 AP005242.2-201ENST00000580065 1175 ntBASIC23.75■■□□□ 1.39
SSH3Q8TE77 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.75■■□□□ 1.39
SSH3Q8TE77 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
SSH3Q8TE77 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
SSH3Q8TE77 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SSH3Q8TE77 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SSH3Q8TE77 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.75■■□□□ 1.39
SSH3Q8TE77 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.75■■□□□ 1.39
SSH3Q8TE77 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SSH3Q8TE77 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.74■■□□□ 1.39
SSH3Q8TE77 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
SSH3Q8TE77 FEM1AP3-201ENST00000403722 1741 ntBASIC23.74■■□□□ 1.39
SSH3Q8TE77 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.74■■□□□ 1.39
SSH3Q8TE77 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SSH3Q8TE77 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
SSH3Q8TE77 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SSH3Q8TE77 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SSH3Q8TE77 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
SSH3Q8TE77 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.74■■□□□ 1.39
SSH3Q8TE77 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.74■■□□□ 1.39
SSH3Q8TE77 FITM1-202ENST00000559294 800 ntBASIC23.74■■□□□ 1.39
SSH3Q8TE77 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.74■■□□□ 1.39
SSH3Q8TE77 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
SSH3Q8TE77 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.74■■□□□ 1.39
SSH3Q8TE77 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
SSH3Q8TE77 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.74■■□□□ 1.39
SSH3Q8TE77 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms