Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 AL020996.1-203ENST00000536896 2307 ntBASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 AC010653.2-201ENST00000623505 997 ntBASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 AL162377.1-201ENST00000618844 1793 ntBASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHKBP1Q8TBC3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 KRT8P41-201ENST00000533985 1514 ntBASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 AC009237.14-201ENST00000609975 1594 ntBASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 AC063952.2-201ENST00000498792 1227 ntBASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 AC022616.7-201ENST00000525383 220 ntBASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 AC139887.4-201ENST00000607877 719 ntBASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHKBP1Q8TBC3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.16■□□□□ 0.82
SHKBP1Q8TBC3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms