Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RDH13Q8NBN7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.04■□□□□ 0.96
RDH13Q8NBN7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RDH13Q8NBN7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RDH13Q8NBN7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RDH13Q8NBN7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RDH13Q8NBN7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
RDH13Q8NBN7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RDH13Q8NBN7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RDH13Q8NBN7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.04■□□□□ 0.96
RDH13Q8NBN7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.04■□□□□ 0.96
RDH13Q8NBN7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RDH13Q8NBN7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 Z99916.2-201ENST00000604037 246 ntBASIC21.03■□□□□ 0.96
RDH13Q8NBN7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RDH13Q8NBN7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 AC087289.5-201ENST00000586076 3175 ntBASIC21.02■□□□□ 0.96
RDH13Q8NBN7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.02■□□□□ 0.96
RDH13Q8NBN7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RDH13Q8NBN7 TEX21P-204ENST00000641479 1693 ntBASIC21.02■□□□□ 0.95
RDH13Q8NBN7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.02■□□□□ 0.95
RDH13Q8NBN7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 RPS2P55-201ENST00000397318 883 ntBASIC21.01■□□□□ 0.95
RDH13Q8NBN7 FAM197Y1-201ENST00000421178 764 ntBASIC21.01■□□□□ 0.95
RDH13Q8NBN7 AL353807.1-201ENST00000427475 662 ntBASIC21.01■□□□□ 0.95
RDH13Q8NBN7 KSR1P1-201ENST00000446298 240 ntBASIC21.01■□□□□ 0.95
RDH13Q8NBN7 AC107956.1-201ENST00000494359 873 ntBASIC21.01■□□□□ 0.95
RDH13Q8NBN7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 AL353708.3-201ENST00000610272 989 ntBASIC21.01■□□□□ 0.95
RDH13Q8NBN7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RDH13Q8NBN7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RDH13Q8NBN7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms