Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 PRSS44-201ENST00000515154 1146 ntBASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 SLC25A1P4-201ENST00000567977 778 ntBASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 TEX21P-204ENST00000641479 1693 ntBASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.18■□□□□ 0.5
ARHGEF39Q8N4T4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 AC093484.2-201ENST00000580996 2166 ntBASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 CRYGFP-201ENST00000418459 633 ntBASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 TSPY21P-201ENST00000433481 731 ntBASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARHGEF39Q8N4T4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARHGEF39Q8N4T4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 TSPY14P-201ENST00000303979 915 ntBASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 AC145285.6-201ENST00000604632 637 ntBASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ARHGEF39Q8N4T4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ARHGEF39Q8N4T4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ARHGEF39Q8N4T4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.14■□□□□ 0.5
ARHGEF39Q8N4T4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms