Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SIX5Q8N196 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SIX5Q8N196 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX5Q8N196 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.67■□□□□ 0.74
SIX5Q8N196 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIX5Q8N196 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIX5Q8N196 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SIX5Q8N196 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX5Q8N196 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX5Q8N196 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX5Q8N196 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX5Q8N196 FAAHP1-202ENST00000446499 1238 ntBASIC19.67■□□□□ 0.74
SIX5Q8N196 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.67■□□□□ 0.74
SIX5Q8N196 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.67■□□□□ 0.74
SIX5Q8N196 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.67■□□□□ 0.74
SIX5Q8N196 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX5Q8N196 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SIX5Q8N196 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX5Q8N196 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX5Q8N196 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIX5Q8N196 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIX5Q8N196 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.66■□□□□ 0.74
SIX5Q8N196 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SIX5Q8N196 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SIX5Q8N196 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SIX5Q8N196 UNC93B7-201ENST00000509439 705 ntBASIC19.66■□□□□ 0.74
SIX5Q8N196 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.66■□□□□ 0.74
SIX5Q8N196 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.66■□□□□ 0.74
SIX5Q8N196 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.66■□□□□ 0.74
SIX5Q8N196 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.66■□□□□ 0.74
SIX5Q8N196 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SIX5Q8N196 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.66■□□□□ 0.74
SIX5Q8N196 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.66■□□□□ 0.74
SIX5Q8N196 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.66■□□□□ 0.74
SIX5Q8N196 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SIX5Q8N196 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 KRT8P41-201ENST00000533985 1514 ntBASIC19.66■□□□□ 0.74
SIX5Q8N196 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX5Q8N196 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 AC092720.2-201ENST00000602388 1665 ntBASIC19.65■□□□□ 0.74
SIX5Q8N196 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.65■□□□□ 0.74
SIX5Q8N196 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.65■□□□□ 0.74
SIX5Q8N196 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SIX5Q8N196 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SIX5Q8N196 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SIX5Q8N196 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SIX5Q8N196 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.65■□□□□ 0.74
SIX5Q8N196 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.65■□□□□ 0.74
SIX5Q8N196 TSSC2-201ENST00000450217 709 ntBASIC19.65■□□□□ 0.74
SIX5Q8N196 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SIX5Q8N196 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.65■□□□□ 0.74
SIX5Q8N196 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.65■□□□□ 0.74
SIX5Q8N196 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.65■□□□□ 0.74
SIX5Q8N196 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.65■□□□□ 0.74
SIX5Q8N196 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.65■□□□□ 0.74
SIX5Q8N196 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.65■□□□□ 0.74
SIX5Q8N196 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX5Q8N196 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.65■□□□□ 0.74
SIX5Q8N196 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.65■□□□□ 0.74
SIX5Q8N196 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SIX5Q8N196 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
SIX5Q8N196 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SIX5Q8N196 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.64■□□□□ 0.74
SIX5Q8N196 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIX5Q8N196 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SIX5Q8N196 HBZP1-201ENST00000354915 429 ntBASIC19.64■□□□□ 0.73
SIX5Q8N196 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SIX5Q8N196 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.64■□□□□ 0.73
SIX5Q8N196 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.64■□□□□ 0.73
SIX5Q8N196 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
SIX5Q8N196 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.64■□□□□ 0.73
SIX5Q8N196 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SIX5Q8N196 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.64■□□□□ 0.73
SIX5Q8N196 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms