Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 RCC2P6-201ENST00000526625 1557 ntBASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 AL390955.1-201ENST00000428694 934 ntBASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 AC011506.1-201ENST00000474329 610 ntBASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM48Q8IWZ4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 AC097488.1-201ENST00000507834 756 ntBASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 SLC25A1P4-201ENST00000567977 778 ntBASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRIM48Q8IWZ4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TRIM48Q8IWZ4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.83■□□□□ 0.61
TRIM48Q8IWZ4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 MESTP1-201ENST00000404287 994 ntBASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 FAM207BP-201ENST00000447172 505 ntBASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 FITM1-202ENST00000559294 800 ntBASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 NAPSB-206ENST00000562112 1266 ntBASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM48Q8IWZ4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 LINC01465-201ENST00000408887 1940 ntBASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms