Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HERC6Q8IVU3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.81■□□□□ 0.92
HERC6Q8IVU3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HERC6Q8IVU3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 PRELID1P1-202ENST00000567272 903 ntBASIC20.8■□□□□ 0.92
HERC6Q8IVU3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.8■□□□□ 0.92
HERC6Q8IVU3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 SMG8-203ENST00000578922 2178 ntBASIC20.79■□□□□ 0.92
HERC6Q8IVU3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 FDX1P1-201ENST00000449115 551 ntBASIC20.79■□□□□ 0.92
HERC6Q8IVU3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HERC6Q8IVU3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HERC6Q8IVU3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms