Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 HLA-A-209ENST00000638375 975 ntBASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC066615.1-201ENST00000640911 628 ntBASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 AL049637.2-201ENST00000641778 930 ntBASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 ZNF815P-204ENST00000434898 1737 ntBASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 AL158211.5-201ENST00000623583 2518 ntBASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 FAM197Y1-201ENST00000421178 764 ntBASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 AL160286.2-201ENST00000567150 934 ntBASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 CD177P1-201ENST00000606252 935 ntBASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQA1Q5Y7H0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 AL031985.4-201ENST00000642138 673 ntBASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQA1Q5Y7H0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQA1Q5Y7H0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQA1Q5Y7H0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQA1Q5Y7H0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQA1Q5Y7H0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQA1Q5Y7H0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HLA-DQA1Q5Y7H0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
HLA-DQA1Q5Y7H0 AL355355.2-201ENST00000442321 338 ntBASIC17.92■□□□□ 0.46
HLA-DQA1Q5Y7H0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms