Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PRPF38BQ5VTL8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 HLA-V-201ENST00000429037 534 ntBASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 AL035252.4-201ENST00000624174 288 ntBASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRPF38BQ5VTL8 RPS2P28-201ENST00000314255 741 ntBASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 AC092474.2-201ENST00000424288 719 ntBASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 AC005034.1-201ENST00000426657 489 ntBASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 MIR2861-201ENST00000636310 90 ntBASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRPF38BQ5VTL8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 AC063926.2-201ENST00000623766 1308 ntBASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 AC007274.1-201ENST00000439805 662 ntBASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 MIR4674-201ENST00000582457 87 ntBASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 AC024243.1-201ENST00000609234 778 ntBASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PRPF38BQ5VTL8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 NSUN5P1-202ENST00000421140 1535 ntBASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 NSUN5P2-203ENST00000457352 1529 ntBASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 KRT8P17-201ENST00000453110 1448 ntBASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 Z83836.1-201ENST00000624605 1642 ntBASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF38BQ5VTL8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 AC034105.1-201ENST00000563488 319 ntBASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 SNHG9-202ENST00000564014 471 ntBASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 AL160286.2-201ENST00000567150 934 ntBASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF38BQ5VTL8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms