Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.4■□□□□ 0.22
EFNB3Q15768 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
EFNB3Q15768 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB3Q15768 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.4■□□□□ 0.22
EFNB3Q15768 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
EFNB3Q15768 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 RN7SL850P-201ENST00000579959 291 ntBASIC16.4■□□□□ 0.22
EFNB3Q15768 AC010653.2-201ENST00000623505 997 ntBASIC16.4■□□□□ 0.22
EFNB3Q15768 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.4■□□□□ 0.22
EFNB3Q15768 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB3Q15768 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB3Q15768 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.4■□□□□ 0.22
EFNB3Q15768 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.4■□□□□ 0.22
EFNB3Q15768 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EFNB3Q15768 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
EFNB3Q15768 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
EFNB3Q15768 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.39■□□□□ 0.22
EFNB3Q15768 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
EFNB3Q15768 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
EFNB3Q15768 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EFNB3Q15768 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EFNB3Q15768 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EFNB3Q15768 AC104417.2-201ENST00000562989 1793 ntBASIC16.39■□□□□ 0.21
EFNB3Q15768 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
EFNB3Q15768 AC073508.3-201ENST00000619697 1419 ntBASIC16.39■□□□□ 0.21
EFNB3Q15768 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EFNB3Q15768 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
EFNB3Q15768 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EFNB3Q15768 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EFNB3Q15768 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
EFNB3Q15768 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.39■□□□□ 0.21
EFNB3Q15768 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.39■□□□□ 0.21
EFNB3Q15768 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.39■□□□□ 0.21
EFNB3Q15768 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EFNB3Q15768 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
EFNB3Q15768 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.39■□□□□ 0.21
EFNB3Q15768 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.39■□□□□ 0.21
EFNB3Q15768 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
EFNB3Q15768 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
EFNB3Q15768 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
EFNB3Q15768 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.38■□□□□ 0.21
EFNB3Q15768 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 PCDHAC2-203ENST00000615316 3011 ntBASIC16.38■□□□□ 0.21
EFNB3Q15768 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.38■□□□□ 0.21
EFNB3Q15768 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
EFNB3Q15768 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
EFNB3Q15768 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
EFNB3Q15768 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
EFNB3Q15768 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.38■□□□□ 0.21
EFNB3Q15768 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.38■□□□□ 0.21
EFNB3Q15768 TSPY17P-201ENST00000450329 467 ntBASIC16.38■□□□□ 0.21
EFNB3Q15768 ECEL1P2-202ENST00000465689 757 ntBASIC16.38■□□□□ 0.21
EFNB3Q15768 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.38■□□□□ 0.21
EFNB3Q15768 FAM87A-204ENST00000613235 858 ntBASIC16.38■□□□□ 0.21
EFNB3Q15768 AL023803.3-201ENST00000615559 522 ntBASIC16.38■□□□□ 0.21
EFNB3Q15768 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
EFNB3Q15768 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
EFNB3Q15768 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
EFNB3Q15768 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EFNB3Q15768 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
EFNB3Q15768 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.37■□□□□ 0.21
EFNB3Q15768 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EFNB3Q15768 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.37■□□□□ 0.21
EFNB3Q15768 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
EFNB3Q15768 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.37■□□□□ 0.21
EFNB3Q15768 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.37■□□□□ 0.21
EFNB3Q15768 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
EFNB3Q15768 HMGA1P5-201ENST00000412453 271 ntBASIC16.37■□□□□ 0.21
EFNB3Q15768 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
EFNB3Q15768 LIN28AP1-201ENST00000429574 405 ntBASIC16.37■□□□□ 0.21
EFNB3Q15768 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.37■□□□□ 0.21
EFNB3Q15768 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.37■□□□□ 0.21
EFNB3Q15768 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.37■□□□□ 0.21
EFNB3Q15768 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EFNB3Q15768 AC010331.1-201ENST00000611423 582 ntBASIC16.37■□□□□ 0.21
EFNB3Q15768 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
EFNB3Q15768 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EFNB3Q15768 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
EFNB3Q15768 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
EFNB3Q15768 AFG3L1P-217ENST00000557444 2447 ntBASIC16.37■□□□□ 0.21
EFNB3Q15768 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.37■□□□□ 0.21
EFNB3Q15768 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
EFNB3Q15768 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms