Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DUX4L26-201ENST00000489078 1255 ntBASIC16.91■□□□□ 0.3
NKX6-1P78426 KRT18P16-201ENST00000510337 1294 ntBASIC16.91■□□□□ 0.3
NKX6-1P78426 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.91■□□□□ 0.3
NKX6-1P78426 FITM1-202ENST00000559294 800 ntBASIC16.91■□□□□ 0.3
NKX6-1P78426 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NKX6-1P78426 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.91■□□□□ 0.3
NKX6-1P78426 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 CYP2D8P-201ENST00000433633 1490 ntBASIC16.91■□□□□ 0.3
NKX6-1P78426 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NKX6-1P78426 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NKX6-1P78426 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NKX6-1P78426 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NKX6-1P78426 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX6-1P78426 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 AC009237.14-201ENST00000609975 1594 ntBASIC16.9■□□□□ 0.3
NKX6-1P78426 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NKX6-1P78426 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX6-1P78426 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX6-1P78426 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX6-1P78426 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.9■□□□□ 0.3
NKX6-1P78426 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.9■□□□□ 0.3
NKX6-1P78426 CR392000.1-201ENST00000624770 1228 ntBASIC16.9■□□□□ 0.3
NKX6-1P78426 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
NKX6-1P78426 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
NKX6-1P78426 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NKX6-1P78426 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.9■□□□□ 0.3
NKX6-1P78426 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-1P78426 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NKX6-1P78426 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
NKX6-1P78426 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
NKX6-1P78426 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
NKX6-1P78426 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
NKX6-1P78426 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NKX6-1P78426 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-1P78426 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-1P78426 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX6-1P78426 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NKX6-1P78426 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-1P78426 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.89■□□□□ 0.29
NKX6-1P78426 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-1P78426 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NKX6-1P78426 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-1P78426 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-1P78426 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NKX6-1P78426 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-1P78426 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.89■□□□□ 0.29
NKX6-1P78426 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-1P78426 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NKX6-1P78426 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX6-1P78426 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.89■□□□□ 0.29
NKX6-1P78426 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX6-1P78426 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.89■□□□□ 0.29
NKX6-1P78426 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NKX6-1P78426 AC010947.1-201ENST00000623454 693 ntBASIC16.89■□□□□ 0.29
NKX6-1P78426 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX6-1P78426 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-1P78426 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX6-1P78426 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX6-1P78426 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-1P78426 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-1P78426 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.89■□□□□ 0.29
NKX6-1P78426 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX6-1P78426 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-1P78426 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NKX6-1P78426 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.88■□□□□ 0.29
NKX6-1P78426 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms