Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CNTNAP1P78357 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CNTNAP1P78357 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CNTNAP1P78357 FAM220CP-201ENST00000395253 831 ntBASIC22.92■■□□□ 1.26
CNTNAP1P78357 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC22.92■■□□□ 1.26
CNTNAP1P78357 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC22.92■■□□□ 1.26
CNTNAP1P78357 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.92■■□□□ 1.26
CNTNAP1P78357 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CNTNAP1P78357 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.92■■□□□ 1.26
CNTNAP1P78357 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNTNAP1P78357 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNTNAP1P78357 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNTNAP1P78357 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC22.92■■□□□ 1.26
CNTNAP1P78357 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNTNAP1P78357 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNTNAP1P78357 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP1P78357 HBZP1-201ENST00000354915 429 ntBASIC22.91■■□□□ 1.26
CNTNAP1P78357 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP1P78357 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP1P78357 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC22.91■■□□□ 1.26
CNTNAP1P78357 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP1P78357 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
CNTNAP1P78357 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.91■■□□□ 1.26
CNTNAP1P78357 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.91■■□□□ 1.26
CNTNAP1P78357 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
CNTNAP1P78357 LINC02084-201ENST00000606069 1096 ntBASIC22.91■■□□□ 1.26
CNTNAP1P78357 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
CNTNAP1P78357 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP1P78357 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CNTNAP1P78357 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.91■■□□□ 1.26
CNTNAP1P78357 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP1P78357 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CNTNAP1P78357 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.91■■□□□ 1.26
CNTNAP1P78357 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.91■■□□□ 1.26
CNTNAP1P78357 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP1P78357 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP1P78357 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
CNTNAP1P78357 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.9■■□□□ 1.26
CNTNAP1P78357 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNTNAP1P78357 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
CNTNAP1P78357 BX276092.5-203ENST00000456199 560 ntBASIC22.9■■□□□ 1.26
CNTNAP1P78357 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC22.9■■□□□ 1.26
CNTNAP1P78357 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNTNAP1P78357 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
CNTNAP1P78357 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.9■■□□□ 1.26
CNTNAP1P78357 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CNTNAP1P78357 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNTNAP1P78357 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
CNTNAP1P78357 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNTNAP1P78357 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CNTNAP1P78357 AC009237.14-201ENST00000609975 1594 ntBASIC22.89■■□□□ 1.26
CNTNAP1P78357 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
CNTNAP1P78357 MIR1233-2-201ENST00000408138 82 ntBASIC22.89■■□□□ 1.26
CNTNAP1P78357 MIR1233-1-201ENST00000408722 82 ntBASIC22.89■■□□□ 1.26
CNTNAP1P78357 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.89■■□□□ 1.26
CNTNAP1P78357 HMGN1P19-201ENST00000436976 333 ntBASIC22.89■■□□□ 1.26
CNTNAP1P78357 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.89■■□□□ 1.26
CNTNAP1P78357 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
CNTNAP1P78357 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
CNTNAP1P78357 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CNTNAP1P78357 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.89■■□□□ 1.25
CNTNAP1P78357 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNTNAP1P78357 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
CNTNAP1P78357 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.89■■□□□ 1.25
CNTNAP1P78357 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNTNAP1P78357 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
CNTNAP1P78357 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNTNAP1P78357 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNTNAP1P78357 MRPL3P1-201ENST00000400109 1033 ntBASIC22.89■■□□□ 1.25
CNTNAP1P78357 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
CNTNAP1P78357 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
CNTNAP1P78357 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.89■■□□□ 1.25
CNTNAP1P78357 AP002414.4-201ENST00000589764 1148 ntBASIC22.89■■□□□ 1.25
CNTNAP1P78357 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.89■■□□□ 1.25
CNTNAP1P78357 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.89■■□□□ 1.25
CNTNAP1P78357 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNTNAP1P78357 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNTNAP1P78357 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CNTNAP1P78357 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.88■■□□□ 1.25
CNTNAP1P78357 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC22.88■■□□□ 1.25
CNTNAP1P78357 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CNTNAP1P78357 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.87■■□□□ 1.25
CNTNAP1P78357 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.87■■□□□ 1.25
CNTNAP1P78357 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CNTNAP1P78357 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
CNTNAP1P78357 AP005212.1-201ENST00000581547 1997 ntBASIC22.87■■□□□ 1.25
CNTNAP1P78357 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.87■■□□□ 1.25
CNTNAP1P78357 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms