Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLDN12P56749 AC079598.2-202ENST00000546624 1451 ntBASIC16.72■□□□□ 0.27
CLDN12P56749 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN12P56749 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN12P56749 Z98044.1-201ENST00000632503 1764 ntBASIC16.72■□□□□ 0.27
CLDN12P56749 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLDN12P56749 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLDN12P56749 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN12P56749 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CLDN12P56749 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLDN12P56749 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN12P56749 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN12P56749 C2orf69P4-201ENST00000565394 541 ntBASIC16.71■□□□□ 0.27
CLDN12P56749 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN12P56749 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN12P56749 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLDN12P56749 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 AC116351.2-201ENST00000606540 1585 ntBASIC16.71■□□□□ 0.27
CLDN12P56749 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN12P56749 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN12P56749 AL512353.2-201ENST00000448759 1962 ntBASIC16.71■□□□□ 0.27
CLDN12P56749 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN12P56749 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CLDN12P56749 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN12P56749 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN12P56749 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CLDN12P56749 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN12P56749 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLDN12P56749 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CLDN12P56749 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN12P56749 CNN2P6-201ENST00000439038 900 ntBASIC16.7■□□□□ 0.26
CLDN12P56749 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN12P56749 NTF6G-201ENST00000591094 616 ntBASIC16.7■□□□□ 0.26
CLDN12P56749 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN12P56749 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN12P56749 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN12P56749 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CLDN12P56749 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CLDN12P56749 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN12P56749 BICD1-207ENST00000551848 1962 ntBASIC16.69■□□□□ 0.26
CLDN12P56749 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN12P56749 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.69■□□□□ 0.26
CLDN12P56749 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN12P56749 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN12P56749 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN12P56749 AC093525.10-201ENST00000625130 1569 ntBASIC16.69■□□□□ 0.26
CLDN12P56749 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN12P56749 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN12P56749 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLDN12P56749 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CLDN12P56749 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN12P56749 MIR638-201ENST00000385237 100 ntBASIC16.69■□□□□ 0.26
CLDN12P56749 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN12P56749 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.69■□□□□ 0.26
CLDN12P56749 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms