Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PER3P56645 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.78■□□□□ 0.44
PER3P56645 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PER3P56645 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.78■□□□□ 0.44
PER3P56645 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.78■□□□□ 0.44
PER3P56645 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PER3P56645 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PER3P56645 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PER3P56645 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PER3P56645 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.77■□□□□ 0.44
PER3P56645 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PER3P56645 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PER3P56645 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PER3P56645 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PER3P56645 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.77■□□□□ 0.44
PER3P56645 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.77■□□□□ 0.44
PER3P56645 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PER3P56645 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PER3P56645 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PER3P56645 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.77■□□□□ 0.44
PER3P56645 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.77■□□□□ 0.44
PER3P56645 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.77■□□□□ 0.44
PER3P56645 AC116562.2-201ENST00000507042 360 ntBASIC17.77■□□□□ 0.44
PER3P56645 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PER3P56645 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.77■□□□□ 0.44
PER3P56645 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PER3P56645 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.77■□□□□ 0.44
PER3P56645 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PER3P56645 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PER3P56645 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.77■□□□□ 0.43
PER3P56645 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PER3P56645 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 NIFKP9-201ENST00000419265 221 ntBASIC17.76■□□□□ 0.43
PER3P56645 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.76■□□□□ 0.43
PER3P56645 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.76■□□□□ 0.43
PER3P56645 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.76■□□□□ 0.43
PER3P56645 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.76■□□□□ 0.43
PER3P56645 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.76■□□□□ 0.43
PER3P56645 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.76■□□□□ 0.43
PER3P56645 AC010947.1-201ENST00000623454 693 ntBASIC17.76■□□□□ 0.43
PER3P56645 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.76■□□□□ 0.43
PER3P56645 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.76■□□□□ 0.43
PER3P56645 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
PER3P56645 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PER3P56645 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PER3P56645 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.76■□□□□ 0.43
PER3P56645 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.76■□□□□ 0.43
PER3P56645 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.76■□□□□ 0.43
PER3P56645 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PER3P56645 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PER3P56645 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PER3P56645 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PER3P56645 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
PER3P56645 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PER3P56645 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PER3P56645 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PER3P56645 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.75■□□□□ 0.43
PER3P56645 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.75■□□□□ 0.43
PER3P56645 AL390955.1-201ENST00000428694 934 ntBASIC17.75■□□□□ 0.43
PER3P56645 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.75■□□□□ 0.43
PER3P56645 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PER3P56645 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.75■□□□□ 0.43
PER3P56645 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PER3P56645 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PER3P56645 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PER3P56645 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PER3P56645 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PER3P56645 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.74■□□□□ 0.43
PER3P56645 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PER3P56645 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PER3P56645 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PER3P56645 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PER3P56645 AC073508.3-201ENST00000619697 1419 ntBASIC17.74■□□□□ 0.43
PER3P56645 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.74■□□□□ 0.43
PER3P56645 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PER3P56645 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PER3P56645 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PER3P56645 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.74■□□□□ 0.43
PER3P56645 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.74■□□□□ 0.43
PER3P56645 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PER3P56645 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PER3P56645 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms