Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCL23P55773 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCL23P55773 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
CCL23P55773 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCL23P55773 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL23P55773 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL23P55773 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCL23P55773 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.93■□□□□ 0.94
CCL23P55773 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.93■□□□□ 0.94
CCL23P55773 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.93■□□□□ 0.94
CCL23P55773 AP000347.1-202ENST00000435868 847 ntBASIC20.93■□□□□ 0.94
CCL23P55773 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.93■□□□□ 0.94
CCL23P55773 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
CCL23P55773 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL23P55773 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL23P55773 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL23P55773 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCL23P55773 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCL23P55773 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL23P55773 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL23P55773 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL23P55773 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.92■□□□□ 0.94
CCL23P55773 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL23P55773 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.92■□□□□ 0.94
CCL23P55773 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.92■□□□□ 0.94
CCL23P55773 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCL23P55773 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCL23P55773 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.92■□□□□ 0.94
CCL23P55773 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.92■□□□□ 0.94
CCL23P55773 PVRIG2P-201ENST00000435460 978 ntBASIC20.92■□□□□ 0.94
CCL23P55773 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCL23P55773 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.92■□□□□ 0.94
CCL23P55773 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.92■□□□□ 0.94
CCL23P55773 AC111152.3-201ENST00000569699 673 ntBASIC20.92■□□□□ 0.94
CCL23P55773 AC011498.5-201ENST00000592027 486 ntBASIC20.92■□□□□ 0.94
CCL23P55773 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCL23P55773 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL23P55773 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCL23P55773 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.92■□□□□ 0.94
CCL23P55773 AC016734.2-201ENST00000624325 1377 ntBASIC20.92■□□□□ 0.94
CCL23P55773 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL23P55773 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL23P55773 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CCL23P55773 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL23P55773 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL23P55773 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCL23P55773 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL23P55773 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL23P55773 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL23P55773 AC004870.1-201ENST00000315132 882 ntBASIC20.91■□□□□ 0.94
CCL23P55773 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL23P55773 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CCL23P55773 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCL23P55773 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CCL23P55773 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCL23P55773 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL23P55773 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.91■□□□□ 0.94
CCL23P55773 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.91■□□□□ 0.94
CCL23P55773 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.91■□□□□ 0.94
CCL23P55773 BX276092.5-203ENST00000456199 560 ntBASIC20.91■□□□□ 0.94
CCL23P55773 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL23P55773 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.91■□□□□ 0.94
CCL23P55773 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.91■□□□□ 0.94
CCL23P55773 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL23P55773 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.91■□□□□ 0.94
CCL23P55773 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCL23P55773 MIR3180-1-201ENST00000580374 94 ntBASIC20.91■□□□□ 0.94
CCL23P55773 MIR3180-3-201ENST00000584616 94 ntBASIC20.91■□□□□ 0.94
CCL23P55773 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCL23P55773 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
CCL23P55773 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCL23P55773 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.91■□□□□ 0.94
CCL23P55773 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
CCL23P55773 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCL23P55773 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCL23P55773 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.9■□□□□ 0.94
CCL23P55773 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCL23P55773 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCL23P55773 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCL23P55773 AC034232.1-201ENST00000506026 1064 ntBASIC20.9■□□□□ 0.94
CCL23P55773 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.9■□□□□ 0.94
CCL23P55773 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CCL23P55773 AL121672.3-201ENST00000608644 468 ntBASIC20.9■□□□□ 0.94
CCL23P55773 AC024243.1-201ENST00000609234 778 ntBASIC20.9■□□□□ 0.94
CCL23P55773 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.9■□□□□ 0.94
CCL23P55773 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.9■□□□□ 0.94
CCL23P55773 AL691432.2-201ENST00000607222 2038 ntBASIC20.9■□□□□ 0.94
CCL23P55773 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCL23P55773 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCL23P55773 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCL23P55773 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.89■□□□□ 0.94
CCL23P55773 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCL23P55773 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.89■□□□□ 0.94
CCL23P55773 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCL23P55773 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.89■□□□□ 0.93
CCL23P55773 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCL23P55773 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCL23P55773 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCL23P55773 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCL23P55773 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms