Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.22■□□□□ 0.99
ACLYP53396 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
ACLYP53396 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACLYP53396 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.22■□□□□ 0.99
ACLYP53396 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.22■□□□□ 0.99
ACLYP53396 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.22■□□□□ 0.99
ACLYP53396 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.21■□□□□ 0.99
ACLYP53396 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ACLYP53396 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ACLYP53396 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
ACLYP53396 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ACLYP53396 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.21■□□□□ 0.99
ACLYP53396 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ACLYP53396 FDX1P1-201ENST00000449115 551 ntBASIC21.21■□□□□ 0.99
ACLYP53396 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.21■□□□□ 0.99
ACLYP53396 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
ACLYP53396 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.21■□□□□ 0.99
ACLYP53396 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
ACLYP53396 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ACLYP53396 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.21■□□□□ 0.99
ACLYP53396 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ACLYP53396 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ACLYP53396 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ACLYP53396 AC016734.2-201ENST00000624325 1377 ntBASIC21.21■□□□□ 0.99
ACLYP53396 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ACLYP53396 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ACLYP53396 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.21■□□□□ 0.99
ACLYP53396 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.99
ACLYP53396 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACLYP53396 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACLYP53396 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACLYP53396 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACLYP53396 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.2■□□□□ 0.98
ACLYP53396 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.2■□□□□ 0.98
ACLYP53396 AL845331.1-201ENST00000424978 1190 ntBASIC21.2■□□□□ 0.98
ACLYP53396 BX276092.5-203ENST00000456199 560 ntBASIC21.2■□□□□ 0.98
ACLYP53396 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.2■□□□□ 0.98
ACLYP53396 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.2■□□□□ 0.98
ACLYP53396 MIR3180-1-201ENST00000580374 94 ntBASIC21.2■□□□□ 0.98
ACLYP53396 MIR3180-3-201ENST00000584616 94 ntBASIC21.2■□□□□ 0.98
ACLYP53396 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACLYP53396 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ACLYP53396 AL121672.3-201ENST00000608644 468 ntBASIC21.2■□□□□ 0.98
ACLYP53396 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACLYP53396 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ACLYP53396 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.2■□□□□ 0.98
ACLYP53396 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ACLYP53396 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACLYP53396 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ACLYP53396 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ACLYP53396 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ACLYP53396 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACLYP53396 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACLYP53396 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
ACLYP53396 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.19■□□□□ 0.98
ACLYP53396 AC111152.3-201ENST00000569699 673 ntBASIC21.19■□□□□ 0.98
ACLYP53396 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ACLYP53396 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.19■□□□□ 0.98
ACLYP53396 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACLYP53396 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACLYP53396 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ACLYP53396 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.19■□□□□ 0.98
ACLYP53396 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACLYP53396 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACLYP53396 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACLYP53396 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACLYP53396 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.18■□□□□ 0.98
ACLYP53396 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.18■□□□□ 0.98
ACLYP53396 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ACLYP53396 AC024243.1-201ENST00000609234 778 ntBASIC21.18■□□□□ 0.98
ACLYP53396 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.18■□□□□ 0.98
ACLYP53396 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.18■□□□□ 0.98
ACLYP53396 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.18■□□□□ 0.98
ACLYP53396 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACLYP53396 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.17■□□□□ 0.98
ACLYP53396 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.17■□□□□ 0.98
ACLYP53396 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.17■□□□□ 0.98
ACLYP53396 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACLYP53396 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ACLYP53396 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACLYP53396 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACLYP53396 AC004870.1-201ENST00000315132 882 ntBASIC21.17■□□□□ 0.98
ACLYP53396 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ACLYP53396 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ACLYP53396 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.17■□□□□ 0.98
ACLYP53396 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.17■□□□□ 0.98
ACLYP53396 AP002383.4-201ENST00000442518 975 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms