Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF2A1P52655 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF2A1P52655 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF2A1P52655 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GTF2A1P52655 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF2A1P52655 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
GTF2A1P52655 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.87■□□□□ 0.61
GTF2A1P52655 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.87■□□□□ 0.61
GTF2A1P52655 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.87■□□□□ 0.61
GTF2A1P52655 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 KRT125P-201ENST00000546827 989 ntBASIC18.87■□□□□ 0.61
GTF2A1P52655 AL451085.2-201ENST00000605085 799 ntBASIC18.87■□□□□ 0.61
GTF2A1P52655 AC010997.5-201ENST00000609182 354 ntBASIC18.87■□□□□ 0.61
GTF2A1P52655 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
GTF2A1P52655 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GTF2A1P52655 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.86■□□□□ 0.61
GTF2A1P52655 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.86■□□□□ 0.61
GTF2A1P52655 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.86■□□□□ 0.61
GTF2A1P52655 AC008764.6-201ENST00000595909 2069 ntBASIC18.86■□□□□ 0.61
GTF2A1P52655 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GTF2A1P52655 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.86■□□□□ 0.61
GTF2A1P52655 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.86■□□□□ 0.61
GTF2A1P52655 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 AC092720.2-201ENST00000602388 1665 ntBASIC18.86■□□□□ 0.61
GTF2A1P52655 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.86■□□□□ 0.61
GTF2A1P52655 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GTF2A1P52655 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
GTF2A1P52655 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GTF2A1P52655 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.86■□□□□ 0.61
GTF2A1P52655 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.86■□□□□ 0.61
GTF2A1P52655 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
GTF2A1P52655 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GTF2A1P52655 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GTF2A1P52655 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GTF2A1P52655 NKILA-202ENST00000614771 2598 ntBASIC18.86■□□□□ 0.61
GTF2A1P52655 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GTF2A1P52655 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GTF2A1P52655 AC133637.1-201ENST00000624115 1537 ntBASIC18.85■□□□□ 0.61
GTF2A1P52655 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GTF2A1P52655 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GTF2A1P52655 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GTF2A1P52655 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GTF2A1P52655 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GTF2A1P52655 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GTF2A1P52655 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GTF2A1P52655 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GTF2A1P52655 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.85■□□□□ 0.61
GTF2A1P52655 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.85■□□□□ 0.61
GTF2A1P52655 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.85■□□□□ 0.61
GTF2A1P52655 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.85■□□□□ 0.61
GTF2A1P52655 MIR4787-201ENST00000607364 84 ntBASIC18.85■□□□□ 0.61
GTF2A1P52655 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GTF2A1P52655 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.85■□□□□ 0.61
GTF2A1P52655 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GTF2A1P52655 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.85■□□□□ 0.61
GTF2A1P52655 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.85■□□□□ 0.61
GTF2A1P52655 AC011676.5-201ENST00000624864 2660 ntBASIC18.85■□□□□ 0.61
GTF2A1P52655 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.85■□□□□ 0.61
GTF2A1P52655 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.84■□□□□ 0.61
GTF2A1P52655 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GTF2A1P52655 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GTF2A1P52655 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GTF2A1P52655 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GTF2A1P52655 ABALON-201ENST00000629058 1903 ntBASIC18.84■□□□□ 0.61
GTF2A1P52655 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.84■□□□□ 0.61
GTF2A1P52655 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.84■□□□□ 0.61
GTF2A1P52655 PKD1P5-201ENST00000532415 10291 ntBASIC18.84■□□□□ 0.61
GTF2A1P52655 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GTF2A1P52655 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GTF2A1P52655 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GTF2A1P52655 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GTF2A1P52655 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms