Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB28P51157 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.59■□□□□ 0.57
RAB28P51157 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB28P51157 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB28P51157 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB28P51157 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB28P51157 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB28P51157 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB28P51157 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB28P51157 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
RAB28P51157 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB28P51157 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB28P51157 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB28P51157 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB28P51157 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB28P51157 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB28P51157 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RAB28P51157 TSPY21P-201ENST00000433481 731 ntBASIC18.58■□□□□ 0.56
RAB28P51157 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB28P51157 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB28P51157 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB28P51157 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB28P51157 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB28P51157 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.58■□□□□ 0.56
RAB28P51157 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB28P51157 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB28P51157 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB28P51157 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB28P51157 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB28P51157 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB28P51157 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB28P51157 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB28P51157 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB28P51157 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB28P51157 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB28P51157 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB28P51157 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB28P51157 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB28P51157 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB28P51157 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.57■□□□□ 0.56
RAB28P51157 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB28P51157 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB28P51157 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB28P51157 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB28P51157 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB28P51157 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB28P51157 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB28P51157 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RAB28P51157 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB28P51157 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB28P51157 AC007952.6-201ENST00000573168 2673 ntBASIC18.57■□□□□ 0.56
RAB28P51157 AC003957.1-201ENST00000625108 2673 ntBASIC18.57■□□□□ 0.56
RAB28P51157 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB28P51157 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB28P51157 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RAB28P51157 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB28P51157 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB28P51157 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB28P51157 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB28P51157 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB28P51157 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB28P51157 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB28P51157 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.56■□□□□ 0.56
RAB28P51157 TSPY15P-201ENST00000457163 923 ntBASIC18.56■□□□□ 0.56
RAB28P51157 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB28P51157 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB28P51157 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB28P51157 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB28P51157 AP000525.1-201ENST00000608286 694 ntBASIC18.56■□□□□ 0.56
RAB28P51157 AC079598.2-202ENST00000546624 1451 ntBASIC18.56■□□□□ 0.56
RAB28P51157 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB28P51157 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB28P51157 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RAB28P51157 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB28P51157 AC096733.2-201ENST00000609937 1394 ntBASIC18.55■□□□□ 0.56
RAB28P51157 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB28P51157 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB28P51157 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB28P51157 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB28P51157 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB28P51157 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAB28P51157 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
RAB28P51157 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB28P51157 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB28P51157 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB28P51157 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB28P51157 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB28P51157 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB28P51157 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAB28P51157 AC097488.1-201ENST00000507834 756 ntBASIC18.55■□□□□ 0.56
RAB28P51157 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB28P51157 PRSS44-201ENST00000515154 1146 ntBASIC18.55■□□□□ 0.56
RAB28P51157 BX088651.1-201ENST00000540551 451 ntBASIC18.55■□□□□ 0.56
RAB28P51157 AP005242.2-201ENST00000580065 1175 ntBASIC18.55■□□□□ 0.56
RAB28P51157 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
RAB28P51157 AL032819.2-201ENST00000624543 2162 ntBASIC18.55■□□□□ 0.56
RAB28P51157 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB28P51157 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB28P51157 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RAB28P51157 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms