Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CXCL12P48061 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXCL12P48061 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CXCL12P48061 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CXCL12P48061 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCL12P48061 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CXCL12P48061 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCL12P48061 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CXCL12P48061 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.15■□□□□ 0.66
CXCL12P48061 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CXCL12P48061 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CXCL12P48061 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.15■□□□□ 0.66
CXCL12P48061 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CXCL12P48061 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCL12P48061 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCL12P48061 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.15■□□□□ 0.66
CXCL12P48061 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CXCL12P48061 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CXCL12P48061 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.15■□□□□ 0.66
CXCL12P48061 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.15■□□□□ 0.66
CXCL12P48061 AP002414.4-201ENST00000589764 1148 ntBASIC19.15■□□□□ 0.66
CXCL12P48061 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.15■□□□□ 0.66
CXCL12P48061 AC024243.1-201ENST00000609234 778 ntBASIC19.15■□□□□ 0.66
CXCL12P48061 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CXCL12P48061 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.15■□□□□ 0.66
CXCL12P48061 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CXCL12P48061 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCL12P48061 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCL12P48061 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.15■□□□□ 0.66
CXCL12P48061 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCL12P48061 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.15■□□□□ 0.66
CXCL12P48061 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCL12P48061 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CXCL12P48061 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CXCL12P48061 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.14■□□□□ 0.66
CXCL12P48061 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CXCL12P48061 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCL12P48061 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCL12P48061 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CXCL12P48061 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCL12P48061 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CXCL12P48061 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CXCL12P48061 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CXCL12P48061 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CXCL12P48061 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.14■□□□□ 0.65
CXCL12P48061 KRT8P26-201ENST00000534154 1276 ntBASIC19.14■□□□□ 0.65
CXCL12P48061 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.14■□□□□ 0.65
CXCL12P48061 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.14■□□□□ 0.65
CXCL12P48061 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CXCL12P48061 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCL12P48061 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCL12P48061 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CXCL12P48061 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCL12P48061 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CXCL12P48061 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.14■□□□□ 0.65
CXCL12P48061 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CXCL12P48061 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCL12P48061 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL12P48061 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CXCL12P48061 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL12P48061 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL12P48061 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.13■□□□□ 0.65
CXCL12P48061 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL12P48061 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL12P48061 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL12P48061 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL12P48061 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.13■□□□□ 0.65
CXCL12P48061 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.13■□□□□ 0.65
CXCL12P48061 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CXCL12P48061 IFNL4P1-201ENST00000607083 540 ntBASIC19.13■□□□□ 0.65
CXCL12P48061 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.13■□□□□ 0.65
CXCL12P48061 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.13■□□□□ 0.65
CXCL12P48061 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL12P48061 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL12P48061 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.13■□□□□ 0.65
CXCL12P48061 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL12P48061 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL12P48061 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.12■□□□□ 0.65
CXCL12P48061 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CXCL12P48061 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.12■□□□□ 0.65
CXCL12P48061 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.12■□□□□ 0.65
CXCL12P48061 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CXCL12P48061 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
CXCL12P48061 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.12■□□□□ 0.65
CXCL12P48061 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCL12P48061 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CXCL12P48061 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCL12P48061 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCL12P48061 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CXCL12P48061 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CXCL12P48061 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CXCL12P48061 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.12■□□□□ 0.65
CXCL12P48061 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CXCL12P48061 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.12■□□□□ 0.65
CXCL12P48061 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.12■□□□□ 0.65
CXCL12P48061 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.12■□□□□ 0.65
CXCL12P48061 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.12■□□□□ 0.65
CXCL12P48061 GPALPP1-207ENST00000611650 899 ntBASIC19.12■□□□□ 0.65
CXCL12P48061 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.12■□□□□ 0.65
CXCL12P48061 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms