Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.81■□□□□ 0.12
SNCAP37840 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNCAP37840 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SNCAP37840 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.8■□□□□ 0.12
SNCAP37840 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SNCAP37840 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SNCAP37840 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 RARRES2P4-201ENST00000514074 484 ntBASIC15.8■□□□□ 0.12
SNCAP37840 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.8■□□□□ 0.12
SNCAP37840 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
SNCAP37840 MFSD11-216ENST00000590393 1141 ntBASIC15.8■□□□□ 0.12
SNCAP37840 AL031963.3-201ENST00000606441 850 ntBASIC15.8■□□□□ 0.12
SNCAP37840 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SNCAP37840 AC008694.1-202ENST00000636953 945 ntBASIC15.8■□□□□ 0.12
SNCAP37840 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.8■□□□□ 0.12
SNCAP37840 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SNCAP37840 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNCAP37840 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.8■□□□□ 0.12
SNCAP37840 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.8■□□□□ 0.12
SNCAP37840 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.8■□□□□ 0.12
SNCAP37840 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 AC090164.3-201ENST00000610780 2143 ntBASIC15.79■□□□□ 0.12
SNCAP37840 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SNCAP37840 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SNCAP37840 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.79■□□□□ 0.12
SNCAP37840 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.79■□□□□ 0.12
SNCAP37840 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 KRT18P68-201ENST00000392293 1000 ntBASIC15.79■□□□□ 0.12
SNCAP37840 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.79■□□□□ 0.12
SNCAP37840 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.79■□□□□ 0.12
SNCAP37840 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.79■□□□□ 0.12
SNCAP37840 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.79■□□□□ 0.12
SNCAP37840 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.79■□□□□ 0.12
SNCAP37840 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.79■□□□□ 0.12
SNCAP37840 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SNCAP37840 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SNCAP37840 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.79■□□□□ 0.12
SNCAP37840 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNCAP37840 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.79■□□□□ 0.12
SNCAP37840 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SNCAP37840 AP001271.2-201ENST00000624018 1556 ntBASIC15.79■□□□□ 0.12
SNCAP37840 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SNCAP37840 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SNCAP37840 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.78■□□□□ 0.12
SNCAP37840 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.78■□□□□ 0.12
SNCAP37840 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.78■□□□□ 0.12
SNCAP37840 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.78■□□□□ 0.12
SNCAP37840 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.78■□□□□ 0.12
SNCAP37840 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.78■□□□□ 0.12
SNCAP37840 AC069236.1-201ENST00000604339 616 ntBASIC15.78■□□□□ 0.12
SNCAP37840 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.78■□□□□ 0.12
SNCAP37840 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.78■□□□□ 0.12
SNCAP37840 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNCAP37840 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms