Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A4P31645 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A4P31645 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SLC6A4P31645 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC6A4P31645 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A4P31645 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A4P31645 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A4P31645 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A4P31645 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
SLC6A4P31645 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC6A4P31645 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC6A4P31645 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC6A4P31645 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.77■□□□□ 0.76
SLC6A4P31645 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC6A4P31645 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC6A4P31645 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC6A4P31645 C2orf69P3-201ENST00000565542 1120 ntBASIC19.77■□□□□ 0.76
SLC6A4P31645 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A4P31645 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A4P31645 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A4P31645 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
SLC6A4P31645 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A4P31645 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A4P31645 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC6A4P31645 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A4P31645 TSPY14P-201ENST00000303979 915 ntBASIC19.76■□□□□ 0.75
SLC6A4P31645 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
SLC6A4P31645 TSPY23P-201ENST00000440136 739 ntBASIC19.76■□□□□ 0.75
SLC6A4P31645 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.76■□□□□ 0.75
SLC6A4P31645 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A4P31645 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.76■□□□□ 0.75
SLC6A4P31645 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.76■□□□□ 0.75
SLC6A4P31645 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A4P31645 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC6A4P31645 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A4P31645 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A4P31645 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A4P31645 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A4P31645 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC6A4P31645 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A4P31645 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A4P31645 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A4P31645 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC6A4P31645 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A4P31645 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.75■□□□□ 0.75
SLC6A4P31645 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A4P31645 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC6A4P31645 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A4P31645 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A4P31645 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SLC6A4P31645 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A4P31645 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC6A4P31645 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC6A4P31645 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SLC6A4P31645 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A4P31645 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC6A4P31645 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC6A4P31645 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A4P31645 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC6A4P31645 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A4P31645 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A4P31645 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A4P31645 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A4P31645 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A4P31645 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.74■□□□□ 0.75
SLC6A4P31645 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC6A4P31645 EGLN1P1-201ENST00000531623 762 ntBASIC19.74■□□□□ 0.75
SLC6A4P31645 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC6A4P31645 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC6A4P31645 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
SLC6A4P31645 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A4P31645 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A4P31645 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A4P31645 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A4P31645 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SLC6A4P31645 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC6A4P31645 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SLC6A4P31645 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A4P31645 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC6A4P31645 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SLC6A4P31645 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A4P31645 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A4P31645 RCN1P1-201ENST00000400413 996 ntBASIC19.73■□□□□ 0.75
SLC6A4P31645 ECEL1P2-202ENST00000465689 757 ntBASIC19.73■□□□□ 0.75
SLC6A4P31645 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.73■□□□□ 0.75
SLC6A4P31645 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLC6A4P31645 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A4P31645 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A4P31645 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A4P31645 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A4P31645 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A4P31645 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SLC6A4P31645 KRT18P22-201ENST00000402024 1347 ntBASIC19.73■□□□□ 0.75
SLC6A4P31645 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A4P31645 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A4P31645 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A4P31645 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A4P31645 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC6A4P31645 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC6A4P31645 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms