Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CFTRP13569 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CFTRP13569 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC33.03■■■□□ 2.88
CFTRP13569 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC33.03■■■□□ 2.88
CFTRP13569 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC33.03■■■□□ 2.88
CFTRP13569 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC33.03■■■□□ 2.88
CFTRP13569 TSPY22P-201ENST00000427496 604 ntBASIC33.03■■■□□ 2.88
CFTRP13569 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC33.03■■■□□ 2.88
CFTRP13569 AL121772.3-201ENST00000610840 674 ntBASIC33.03■■■□□ 2.88
CFTRP13569 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CFTRP13569 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CFTRP13569 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CFTRP13569 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
CFTRP13569 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CFTRP13569 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CFTRP13569 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CFTRP13569 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CFTRP13569 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC33.02■■■□□ 2.88
CFTRP13569 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC33.02■■■□□ 2.88
CFTRP13569 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CFTRP13569 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
CFTRP13569 EP400NL-214ENST00000641289 2402 ntBASIC33.02■■■□□ 2.88
CFTRP13569 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CFTRP13569 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC33.02■■■□□ 2.88
CFTRP13569 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CFTRP13569 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CFTRP13569 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CFTRP13569 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CFTRP13569 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC33.01■■■□□ 2.88
CFTRP13569 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.88
CFTRP13569 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.88
CFTRP13569 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC33.01■■■□□ 2.88
CFTRP13569 TOB2P1-201ENST00000469761 992 ntBASIC33.01■■■□□ 2.88
CFTRP13569 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC33.01■■■□□ 2.88
CFTRP13569 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC33.01■■■□□ 2.88
CFTRP13569 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC33.01■■■□□ 2.87
CFTRP13569 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.87
CFTRP13569 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC33.01■■■□□ 2.87
CFTRP13569 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC33.01■■■□□ 2.87
CFTRP13569 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CFTRP13569 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC33■■■□□ 2.87
CFTRP13569 AL391807.1-203ENST00000604392 2365 ntBASIC33■■■□□ 2.87
CFTRP13569 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CFTRP13569 LINC00265-3P-201ENST00000447588 903 ntBASIC33■■■□□ 2.87
CFTRP13569 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC33■■■□□ 2.87
CFTRP13569 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC33■■■□□ 2.87
CFTRP13569 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC33■■■□□ 2.87
CFTRP13569 PNN-202ENST00000553331 656 ntTSL 3 BASIC33■■■□□ 2.87
CFTRP13569 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC33■■■□□ 2.87
CFTRP13569 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC33■■■□□ 2.87
CFTRP13569 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
CFTRP13569 VPS51-217ENST00000639871 243 ntTSL 5 BASIC33■■■□□ 2.87
CFTRP13569 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
CFTRP13569 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CFTRP13569 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CFTRP13569 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
CFTRP13569 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CFTRP13569 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC33■■■□□ 2.87
CFTRP13569 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC33■■■□□ 2.87
CFTRP13569 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
CFTRP13569 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CFTRP13569 AL023284.2-201ENST00000405850 579 ntBASIC32.99■■■□□ 2.87
CFTRP13569 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC32.99■■■□□ 2.87
CFTRP13569 AL662844.1-201ENST00000546340 181 ntBASIC32.99■■■□□ 2.87
CFTRP13569 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CFTRP13569 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
CFTRP13569 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CFTRP13569 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
CFTRP13569 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC32.99■■■□□ 2.87
CFTRP13569 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CFTRP13569 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC32.99■■■□□ 2.87
CFTRP13569 AC104417.2-201ENST00000562989 1793 ntBASIC32.99■■■□□ 2.87
CFTRP13569 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC32.99■■■□□ 2.87
CFTRP13569 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CFTRP13569 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CFTRP13569 FOSL1P1-201ENST00000511041 816 ntBASIC32.99■■■□□ 2.87
CFTRP13569 AC091304.2-201ENST00000564639 760 ntBASIC32.99■■■□□ 2.87
CFTRP13569 MIR3917-201ENST00000580971 93 ntBASIC32.99■■■□□ 2.87
CFTRP13569 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CFTRP13569 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
CFTRP13569 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
CFTRP13569 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC32.98■■■□□ 2.87
CFTRP13569 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC32.98■■■□□ 2.87
CFTRP13569 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CFTRP13569 HLA-A-201ENST00000376802 1334 ntBASIC32.98■■■□□ 2.87
CFTRP13569 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CFTRP13569 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC32.98■■■□□ 2.87
CFTRP13569 AC079834.2-201ENST00000609776 1949 ntBASIC32.98■■■□□ 2.87
CFTRP13569 AKR1C7P-201ENST00000305623 895 ntBASIC32.98■■■□□ 2.87
CFTRP13569 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CFTRP13569 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CFTRP13569 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC32.98■■■□□ 2.87
CFTRP13569 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CFTRP13569 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CFTRP13569 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CFTRP13569 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CFTRP13569 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CFTRP13569 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC32.98■■■□□ 2.87
CFTRP13569 MIR3180-5-201ENST00000583743 153 ntBASIC32.98■■■□□ 2.87
CFTRP13569 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC32.98■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms